研究成果

発表論文(平成28年度~平成29年度)

1.Arimura Y, Kono T, Kino K, Kurumizaka H.
Structural polymorphism of the Escherichia coli poly-α-L-glutamate synthetase RimK.
Acta Crystallogr F Struct Biol Commun, 2018
Pubmed ID: 29969101
2.Osakabe A, Lorkovic ZJ, Kobayashi W, Tachiwana H, Yelagandula R, Kurumizaka H, Berger F.
Histone H2A variants confer specific properties to nucleosomes and impact on chromatin accessibility.
Nucleic Acids Res., 2018
Pubmed ID: 29945241
3.Higgs MR, Sato K, Reynolds JJ, Begum S, Bayley R, Goula A, Vernet A, Paquin KL, Skalnik DG, Kobayashi W, Takata M, Howlett NG, Kurumizaka H, Kimura H, Stewart GS.
Histone Methylation by SETD1A Protects Nascent DNA through the Nucleosome Chaperone Activity of FANCD2.
Mol Cell., 2018
Pubmed ID: 29937342 [領域内共同研究:胡桃坂・木村]
4.Luo D, Kato D, Nogami J, Ohkawa Y, Kurumizaka H, Kono H.
MNase, as a probe to study the sequence-dependent site exposures in the +1 nucleosomes of yeast.
Nucleic Acids Res. , 2018
Pubmed ID: 29893974 [領域内共同研究:大川・胡桃坂・河野]
5.Saikusa K, Osakabe A, Kato D, Fuchigami S, Nagadoi A, Nishimura Y, Kurumizaka H, Akashi S.
Structural Diversity of Nucleosomes Characterized by Native Mass Spectrometry.
Anal Chem. , 2018
Pubmed ID: 29860831
6. Harada A, Maehara K, Ono Y, Taguchi H, Yoshioka K, Kitajima Y, Xie Y, Sato Y, Iwasaki T, Nogami J, Okada S, Komatsu T, Semba Y, Takemoto T, Kimura H, Kurumizaka H, Ohkawa Y.
Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration.
Nat Commun., 2018
Pubmed ID: 29643389 [領域内共同研究:木村・胡桃坂・大川] 
7.Takizawa Y, Tanaka H, Machida S, Koyama M, Maehara K, Ohkawa Y, Wade PA, Wolf M, Kurumizaka H.
Cryo-EM structure of the nucleosome containing the ALB1 enhancer DNA sequence.
Open Biol., 2018
Pubmed ID: 29563192 [領域内共同研究:大川・胡桃坂] 
8.Tanabe K, Liu J, Kato D, Kurumizaka H, Yamatsugu K, Kanai M, Kawashima SA.
LC-MS/MS-based quantitative study of the acyl group- and site-selectivity of human sirtuins to acylated nucleosomes.
Sci Rep., 2018
Pubmed ID: 29422688
9.Okamoto Y, Iwasaki WM, Kugou K, Takahashi KK, Oda A, Sato K, Kobayashi W, Kawai H, Sakasai R, Takaori-Kondo A, Yamamoto T, Kanemaki MT, Taoka M, Isobe T, Kurumizaka H, Innan H, Ohta K, Ishiai M, Takata M.
Replication stress induces accumulation of FANCD2 at central region of large fragile genes.
Nucleic Acids Res. , 2018
Pubmed ID: 29394375
10.Machida S, Takizawa Y, Ishimaru M, Sugita Y, Sekine S, Nakayama JI, Wolf M, Kurumizaka H.
Structural Basis of Heterochromatin Formation by Human HP1.
Molecular Cell, 2018
Pubmed ID: 29336876
11.Shiraishi K, Shindo A, Harada A, Kurumizaka H, Kimura H, Ohkawa Y, Matsuyama H.
Roles of histone H3.5 in human spermatogenesis and spermatogenic disorders.
Andrology. , 2018
Pubmed ID: 29179259 [領域内共同研究:胡桃坂・木村・大川] 
12.Koyama M, Kurumizaka H.
Structural diversity of the nucleosome.
J Biochem., 2017
Pubmed ID: 29161414
13.Fukuto A, Ikura M, Ikura T, Sun J, Horikoshi Y, Shima H, Igarashi K, Kusakabe M, Harata M, Horikoshi N, Kurumizaka H, Kiuchi Y, Tashiro S.
SUMO modification system facilitates the exchange of histone variant H2A.Z-2 at DNA damage sites.
Nucleus., 2017
Pubmed ID: 29095668 [領域内共同研究:原田・胡桃坂・田代]
14.Fuse T, Katsumata K, Morohoshi K, Mukai Y, Ichikawa Y, Kurumizaka H, Yanagida A, Urano T, Kato H, Shimizu M.
Parallel mapping with site-directed hydroxyl radicals and micrococcal nuclease revealsstructuralfeatures of positioned nucleosomes in vivo.
PLoS One. , 2017
Pubmed ID: 29073207
15.Hatanaka Y, Tsusaka T, Shimizu N , Morita K, Suzuki T, Machida S, Satoh M, Honda A, Hirose M, Kamimura S, Ogonuki N, Nakamura T, Inoue K, Hosoi Y, Dohmae N, Nakano T, Kurumizaka H, Matsumoto K, Shinkai Y, Ogura A.
Histone H3 Methylated at Arginine 17 Is Essential for Reprogramming the Paternal Genome in Zygotes.
Cell Rep., 2017
Pubmed ID: 28930672
16. Kawaguchi T, Machida S, Kurumizaka H, Tagami H, Nakayama JI.
Phosphorylation of CBX2 controls its nucleosome-binding specificity.
J Biochem., 2017
Pubmed ID: 28992316 [領域内共同研究:胡桃坂・中山]
17. Hori T, Shang WH, Hara M, Ariyoshi M, Arimura Y, Fujita R, Kurumizaka H, Fukagawa T.
Association of M18BP1/KNL2 with CENP-A Nucleosome Is Essential for Centromere Formation in Non-mammalian Vertebrates.
Dev Cell., 2017
Pubmed ID: 28743004 [領域内共同研究:胡桃坂・堀・有吉]
18. Ishiguro T, Amamoto Y, Tanabe K, Liu J, Kajino H, Fujimura A, Aoi Y, Osakabe A, Horikoshi N, Kurumizaka H, Yamatsugu Y, Kawashima SA, Kanai M.
Synthetic chromatin acylation by artificial catalyst system.
Chem., 2017
[領域内共同研究:胡桃坂・川島]
19.Amamoto Y, Aoi Y, Nagashima N, Suto H, Yoshidome, Arimura Y, Osakabe A, Kato D, Kurumizaka H, Kawashima SA, Yamatsugu Y, and Kanai M.
Synthetic Posttranslational Modifications: Chemical Catalyst-Driven Regioselective Histone Acylation of Native Chromatin.
J Am Chem Soc., 2017
Pubmed ID: 28534629 [領域内共同研究:胡桃坂・川島]
20. Kato D, Osakabe A, Arimura Y, Mizukami Y, Horikoshi N, Saikusa K,Akashi S, Nishimura Y, Park S.Y.,Nogami J, Maehara K, Ohkawa Y, Matsumoto A, Kono H, Inoue R, Sugiyama M, Kurumizaka H.
Crystal structure of the overlapping dinucleosome composed of hexasome and octasome.
Science, 2017
Pubmed ID: 28408607  [領域内共同研究:大川・河野・杉山・胡桃坂]
21.Bednar J, Garcia-Saez I, Boopathi R, Cutter AR, Papai G, Reymer A, Syed SH, Lone IN, Tonchev O, Crucifix C, Menoni H, Papin C, Skoufias DA, Kurumizaka H, Lavery R, Hamiche A, Hayes JJ, Schultz P, Angelov D, Petosa C, Dimitrov S.
Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.
Mol Cell., 2017
Pubmed ID: 28475873  
22. Taguchi, H, Xie Y; Horikoshi N; Maehara K; Harada A; Nogami J; Sato K, Arimura Y; Osakabe A, Kujirai, T, Iwasaki T, Semba, Y, Tachibana T, Kimura, H, Ohkawa Y, Kurumizaka H
Crystal structure and characterization of novel human histone H3 variants, H3.6, H3.7, and H3.8.
Biochemistry, 2017
 [領域内共同研究:木村・大川・胡桃坂]
23. Barral S, Morozumi Y, Tanaka H, Montellier E, Govin J, de Dieuleveult M, Charbonnier G, Couté Y, Puthier D,Buchou T, Boussouar F,Urahama T, Fenaille F, Curtet S, Héry P,Fernandez-Nunez N, Shiota H, Gérard M, Rousseaux S, Kurumizaka H, Khochbin S.
Histone Variant H2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells.
Mol Cell., 2017
Pubmed ID: 28366643 
24. Kakumu E, Nakanishi S, Shiratori HM, Kato A, Kobayashi W, Machida S, Yasuda T, Adachi N, Saito N, Ikura T, Kurumizaka H, Kimura H8, Yokoi M, Sakai W, Sugasawa K.
Xeroderma pigmentosum group C protein interacts with histones: regulation by acetylated states of histone H3.
Genes Cells. , 2017
Pubmed ID: 28233440 [領域内共同研究:齊藤・胡桃坂・木村・菅澤]
25. Osakabe A, Arimura Y, Matsumoto S, Horikoshi N, Sugasawa K, Kurumizaka H.
Polymorphism of apyrimidinic DNA structures in the nucleosome.
Sci Rep., 2017
Pubmed ID: 28139742 [領域内共同研究:胡桃坂・菅澤]
26.Kujirai T, Horikoshi N, Xie Y, Taguchi H, Kurumizaka H.
Identification of the amino acid residues responsible for stable nucleosome formation by histone H3.Y.
Nucleus., 2017
Pubmed ID: 28118111 
27.Ueda J, Harada A, Urahama T, Machida S, Maehara K, Hada M, Makino Y, Nogami J, Horikoshi N, Osakabe A, Taguchi H, Tanaka H, Tachiwana H, Yao T, Yamada M, Iwamoto T, Isotani A, Ikawa M, Tachibana T, Okada Y, Kimura H, Ohkawa Y, Kurumizaka H, Yamagata K.
Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis.
Cell Rep., 2017
Pubmed ID: 28099840 [領域内共同研究:木村・大川・胡桃坂・山縣]
28. Koyama M, Nagakura W, Tanaka H, Kujirai T, Chikashige Y, Haraguchi T, Hiraoka Y, Kurumizaka H.
In vitro reconstitution and biochemical analyses of the Schizosaccharomyces pombe nucleosome.
Biochem Biophys Res Commun. , 2016
Pubmed ID: 27890612  [領域内共同研究:原口・平岡・胡桃坂]
29. Sato K, Shimomuki M, Katsuki Y, Takahashi D, Kobayashi W, Ishiai M, Miyoshi H, Takata M, Kurumizaka H.
FANCI-FANCD2 stabilizes the RAD51-DNA complex by binding RAD51 and protects the 5'-DNA end.
Nucleic Acids Res. , 2016
Pubmed ID: 27694619  
30. Sato Y, Kujirai T, Arai R, Asakawa H, Ohtsuki C, Horikoshi N, Yamagata K, Ueda J, Nagase T, Haraguchi T, Hiraoka Y, Kimura A, Kurumizaka H, Kimura H.
A Genetically Encoded Probe for Live-Cell Imaging of H4K20 Monomethylation.
J Mol Biol. , 2016
Pubmed ID: 27534817  
 [領域内共同研究:木村・浅川・原口・山縣・上田・平岡・胡桃坂]
31. Rouland Y, Ouararhni K, NaidenovM, Ramos L, Shuaib M, Syed S.H, Lone I.N, Boopathi R, Fontaine E, Papai G, Tachiwana H, Gautier T, Skoufias D, Padmanabhan K, Bednar J, Kurumizaka H, Schultz P, Angelov D, Hamiche A, Dimitrov S
The flexible ends of CENP-A nucleosome are required for mitotic fidelity.
Molecular Cell. 2016
in press
32. Saotome M, Saito K, Onodera K, Kurumizaka H, Kagawa W
Structure of the human DNA-repair protein RAD52 containing surface mutations.
Acta Crystallogr F Struct Biol Commun. 2016
Pubmed ID: 27487923 
 [領域内共同研究:胡桃坂・香川]
33. Naoki Horikoshi, Yasuhiro Arimura, Hiroyuki Taguchi, Hitoshi Kurumizaka
Crystal structures of heterotypic nucleosomes containing histones H2A.Z and H2A
Open Biol. 2016
Pubmed ID: 27358293 
34. Shinichi Machida, Satoshi Sekine, Yuuki Nishiyama, Naoki Horikoshi, Hitoshi Kurumizaka
Structural and biochemical analyses of monoubiquitinated human histones H2B and H4.
Open Biol. 2016
Pubmed ID: 27335322 
35. Ichikawa Y, Morohashi N, Tomita N, Mitchell AP, Kurumizaka H, Shimizu M.
Sequence-directed nucleosome-depletion is sufficient to activate transcription from a yeast core promoter in vivo.
Biochem Biophys Res Commun. 2016
Pubmed ID: 27208777  
36. Kobayashi W, Takaku M, Machida S, Tachiwana H, Maehara K, Ohkawa Y, Kurumizaka H.
Chromatin architecture may dictate the target site for DMC1, but not for RAD51, during homologous pairing.
Sci Rep. 2016
Pubmed ID: 27052786 [領域内共同研究:胡桃坂・大川]

発表論文(平成25年度~平成27年度)

1. Kujirai T, Horikoshi N, Sato K, Maehara K, Machida S, Osakabe A, Kimura H, Ohkawa Y, Kurumizaka H.
Structure and function of human histone H3.Y nucleosome.
Nucleic Acids Res. 2016
Pubmed ID: 27016736  [領域内共同研究:胡桃坂・木村・大川]
2. Takaku M, Grimm SA, Shimbo T, Perera L, Menafra R, Stunnenberg HG, Archer TK, Machida S, Kurumizaka H, Wade PA.
GATA3-dependent cellular reprogramming requires activation-domain dependent recruitment of a chromatin remodeler
Genome Biol. 2016
Pubmed ID: 26922637  
3. Ohtomo H, Akashi S, Moriwaki Y, Okuwaki M, Osakabe A, Nagata K, Kurumizaka H, Nishimura Y.
C-terminal acidic domain of histone chaperone human NAP1 is an efficient binding assistant for histone H2A-H2B, but not H3-H4
Genes Cells. 2016
Pubmed ID: 26841755  
4. Horikoshi, N., Tachiwana, H., Kagawa, W., Osakabe, A., Matsumoto, S., Iwai, S., Sugasawa, K., and Kurumizaka, H.
Crystal structure of the nucleosome containing ultraviolet light-induced cyclobutane pyrimidine dimer
Biochem Biophys Res Commun.2016
Pubmed ID: 26837048 責任著者、[領域内共同研究:香川・胡桃坂]
 
5. Urahama, T., Harada, A., Maehara, K., Horikoshi, N., Sato, K., Sato, Y., Shiraishi, K., Sugino, N., Osakabe, A., Tachiwana, H., Kagawa, W., Kimura, H., Ohkawa, Y., and Kurumizaka, H.
Histone H3.5 forms an unstable nucleosome and accumulates around transcription start sites in human testis
Epigenetics & Chromatin.2016
(web: http://www.epigeneticsandchromatin.com/content/9/1/2) 責任著者[領域内共同研究:香川・木村・大川・胡桃坂]
 
6. Machida, S., Hayashida, R., Takaku, M., Fukuto, A., Sun, J., Kinomura, A., Tashiro, S., and Kurumizaka, H.
Relaxed chromatin formation and weak suppression of homologous pairing by the testis-specific linker histone H1T
Biochemistry.2016
Pubmed ID: 26757249 責任著者
 [領域内共同研究:田代・胡桃坂]
7. Suzuki, Y., Horikoshi, N., Kato, D., Kurumizaka, H.
Crystal structure of the nucleosome containing histone H3 with crotonylated lysine 122
Biochem Biophys Res Commun.2015
(web: http://www.sciencedirect.com/science/article/pii/S0006291X15310469) 責任著者
8. Klein, B. J., Muthurajan, U. M., Lalonde, M. E., Gibson, M. D., Andrews, F. H., Hepler, M., Machida, S., Yan, K., Kurumizaka, H., Poirier, M. G., Cote, J., Luger, K., and Kutateladze, T. G.
Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation
Nucleic Acids Res.2015
Pubmed ID: 26626149 共著者
9. Osakabe, A., Tachiwana, H., Kagawa, W., Horikoshi, N., Matsumoto, S., Hasegawa, M., Matsumoto, N., Toga, T., Yamamoto, J., Hanaoka, F., Thoma, N. H., Sugasawa, K., Iwai, S., and Kurumizaka, H.
Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome
Sci Rep.2015
Pubmed ID: 26573481 責任著者、[領域内共同研究:香川・胡桃坂]
 
10. Osakabe, A., Adachi, F., Arimura, Y., Maehara, K., Ohkawa, Y., and Kurumizaka, H.
Influence of DNA methylation on positioning and DNA flexibility of nucleosomes with pericentric satellite DNA
Open Biol.2015
Pubmed ID: 26446621 責任著者、[領域内共同研究:大川・胡桃坂]
11. Kagawa, W., Arai, T., Ishikura, S., Kino, K., and Kurumizaka, H.
Structure of RizA, an L-amino-acid ligase from Bacillus subtilis
Acta Crystallogr F Struct Biol Commun.2015
Pubmed ID: 26323296 責任著者、[領域内共同研究:香川・胡桃坂]
12. Sugiyama, M., Horikoshi, N., Suzuki, Y., Taguchi, H., Kujirai, T., Inoue, R., Oba, Y., Sato, N., Martel, A., Porcar, L., Kurumizaka, H.
Solution structure of variant H2A.Z.1 nucleosome investigated by small-angle X-ray and neutron scatterings
Biochem Biophys Rep.2015
責任著者
 [領域内共同研究:杉山・胡桃坂]
13. Okimoto, S., Sun, J., Fukuto, A., Horikoshi, Y., Matsuda, S., Matsuda, T., Ikura, M., Ikura, T., Machida, S., Kurumizaka, H., Miyamoto, Y., Oka, M., Yoneda, Y., Kiuchi, Y., and Tashiro, S.
hCAS/CSE1L regulates RAD51 distribution and focus formation for homologous recombinational repair
Genes Cells.2015
Pubmed ID: 26123175 [領域内共同研究 胡桃坂・岡・米田・田代]
14. Nagpal, H., Hori, T., Furukawa, A., Sugase, K., Osakabe, A., Kurumizaka, H., and Fukagawa, T.
Dynamic changes in CCAN organization through CENP-C during cell-cycle progression.
Mol Biol Cell.2015
Pubmed ID: 26354420  [領域内共同研究 堀・胡桃坂]
15. Oroguchi, T, Sekiguchi, Y, Kobayashi, A, Masaki, Y, Fukuda, A, Hashimoto, S, Nakasako, M, Ichikawa, Y, Kurumizaka, H, Shimizu, M, Inui, Y, Matsunaga, S, Kato, T, Namba, K, Yamaguchi, K, Kuwata, K, Kameda, H, Fukui, N, Kawata, Y, Kameshima, T, Takayama, Y, Yonekura, K, and Yamamoto, M.
Cryogenic coherent x-ray diffraction imaging for biological non-crystalline particles using the KOTOBUKI-1 diffraction apparatus at SACLA
J. Phys. B: At. Mol. Opt. Phys.2015
Pubmed ID: 24089834
16. Okimoto, S., Sun, J., Fukuto, A., Horikoshi, Y., Matsuda, S., Matsuda, T., Ikura, M., Ikura, T., Machida, S., Kurumizaka, H., Miyamoto, Y., Oka, M., Yoneda, Y., Kiuchi, Y., and Tashiro, S.
hCAS/CSE1L regulates RAD51 distribution and focus formation for homologous recombinational repair
Genes Cells.2015
Pubmed ID: 26123175 共著者、[領域内共同研究 胡桃坂・米田・田代]
17. Hira, A., Yoshida, K., Sato, K., Okuno, Y., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Shimamoto, A., Tahara, H., Ito, E., Kojima, S., Kurumizaka, H., Ogawa, S., Takata, M., Yabe, H., and Yabe, M.
Mutations in the gene encoding the E2 conjugating enzyme UBE2T cause Fanconi anemia
Am J Hum Genet.2015
Pubmed ID: 26046368
18. Takahashi, D., Sato, K., Hirayama, E., Takata, M., and Kurumizaka, H.
Human FAN1 promotes strand incision in 5'-flapped DNA complexed with RPA
J Biochem.2015
Pubmed ID:25922199 責任著者
19. Sugimoto, N., Maehara, K., Yoshida, K., Yasukouchi, S., Osano, S., Watanabe, S., Aizawa, M., Yugawa, T., Kiyono, T., Kurumizaka, H., Ohkawa, Y., and Fujita, M.
Cdt1-binding protein GRWD1 is a novel histone-binding protein that facilitates MCM loading through its influence on chromatin architecture
Nucleic Acids Res.2015
Pubmed ID: 25990725 [領域内共同研究 胡桃坂・大川]
20. Saikusa, K., Shimoyama, S., Asano, Y., Nagadoi, A., Sato, M., Kurumizaka, H., Nishimura, Y., and Akashi, S.
Charge-neutralization effect of the tail regions on the histone H2A/H2B dimer structure
Protein Sci.2015
Pubmed ID: 25752661
21. Saikusa, K., Nagadoi, A., Hara, K., Fuchigami, S., Kurumizaka, H., Nishimura, Y., and Akashi, S.
Mass spectrometric approach for characterizing the disordered tail regions of the histone H2A/H2B dimer
Anal Chem.2015
Pubmed ID: 25594579
22. Kono, H., Shirayama, K., Arimura, Y., Tachiwana, H., and Kurumizaka, H.
Two arginine residues suppress the flexibility of nucleosomal DNA in the canonical nucleosome core
PLoS One.2015>
Pubmed ID:25786215 [領域内共同研究 河野・胡桃坂]
23. Kato, D., Osakabe, A., Tachiwana, H., Tanaka, H., and Kurumizaka, H.
Human tNASP promotes in vitro nucleosome assembly with histone H3.3
Biochemistry.2015>
Pubmed ID: 25615412 責任著者
24. Ichikawa, Y., Nishimura, Y., Kurumizaka, H., and Shimizu, M.
Nucleosome organization and chromatin dynamics in telomeres
Biomol Concepts.2015
Pubmed ID: 25720088
25. Fujita, R., Otake, K., Arimura, Y., Horikoshi, N., Miya, Y., Shiga, T., Osakabe, A., Tachiwana, H., Ohzeki, J. I., Larionov, V., Masumoto, H., and Kurumizaka, H.
Stable complex formation of CENP-B with the CENP-A nucleosome
Nucleic Acids Res.2015
Pubmed ID: 25916850 責任共著者
26. Urahama, T., Horikoshi, N., Osakabe, A., Tachiwana, H., and Kurumizaka, H.
Structure of human nucleosome containing the testis-specific histone variant TSH2B
Acta Crystallogr F Struct Biol Commun.2014
Pubmed ID: 24699735
27. Unno, J., Itaya, A., Taoka, M., Sato, K., Tomida, J., Sakai, W., Sugasawa, K., Ishiai, M., Ikura, T., Isobe, T., Kurumizaka, H., and Takata, M.
FANCD2 binds CtIP and regulates DNA-end resection during DNA interstrand crosslink repair
Cell Rep.2014
Pubmed ID: 24794430
28. Takeuchi, K., Nishino, T., Mayanagi, K., Horikoshi, N., Osakabe, A., Tachiwana, H., Hori, T., Kurumizaka, H., and Fukagawa, T.
The centromeric nucleosome-like CENP-T-W-S-X complex induces positive supercoils into DNA
Nucleic Acids Res.2014
Pubmed ID: 24234442 [領域内共同研究 堀・胡桃坂]
29. Takahashi, D., Sato, K., Shimomuki, M., Takata, M., and Kurumizaka, H.
Expression and purification of human FANCI and FANCD2 using Escherichia coli cells
Protein Expr Purif.2014
Pubmed ID: 25168188 責任著者
30. Taguchi, H., Horikoshi, N., Arimura, Y., and Kurumizaka, H.
A method for evaluating nucleosome stability with a protein-binding fluorescent dye
Methods.2014
Pubmed ID: 25220913 責任著者
31. Sugiyama, M., Arimura, Y., Shirayama, K., Fujita, R., Oba, Y., Sato, N., Inoue, R., Oda, T., Sato, M., Heenan, R. K., and Kurumizaka, H.
Distinct features of the histone core structure in nucleosomes containing the histone H2A.B variant
Biophys J.2014
Pubmed ID: 24853749 責任共著者、[領域内共同研究 杉山・小田・胡桃坂]
32. Sato, K., Ishiai, M., Takata, M., and Kurumizaka, H.
Defective FANCI binding by a fanconi anemia-related FANCD2 mutant
PLoS One.2014
Pubmed ID:25489943 責任著者
33. Osakabe, A., Takahashi, Y., Murakami, H., Otawa, K., Tachiwana, H., Oma, Y., Nishijima, H., Shibahara, K. I., Kurumizaka, H., and Harata, M.
DNA binding properties of the actin-related protein Arp8 and its role in DNA repair
PLoS One.2014
Pubmed ID: 25299602 [領域内共同研究 胡桃坂・原田]
34. Nishibuchi, G., Machida, S., Osakabe, A., Murakoshi, H., Hiragami-Hamada, K., Nakagawa, R., Fischle, W., Nishimura, Y., Kurumizaka, H., Tagami, H., and Nakayama, J.
N-terminal phosphorylation of HP1alpha increases its nucleosome-binding specificity
Nucleic Acids Res.2014
Pubmed ID: 25332400
35. Machida, S., Takaku, M., Ikura, M., Sun, J., Suzuki, H., Kobayashi, W., Kinomura, A., Osakabe, A., Tachiwana, H., Horikoshi, Y., Fukuto, A., Matsuda, R., Ura, K., Tashiro, S., Ikura, T., and Kurumizaka, H.
Nap1 stimulates homologous recombination by RAD51 and RAD54 in higher-ordered chromatin containing histone H1
Sci Rep.2014
Pubmed ID: 24798879 責任共著者、[領域内共同研究 田代・胡桃坂]
36. Lacoste, N., Woolfe, A., Tachiwana, H., Garea, A. V., Barth, T., Cantaloube, S., Kurumizaka, H., Imhof, A., and Almouzni, G.
Mislocalization of the centromeric histone variant CenH3/CENP-A in human cells depends on the chaperone DAXX
Mol Cell.2014
Pubmed ID: 24530302
37. Kobayashi, W., Sekine, S., Machida, S., and Kurumizaka, H.
Green fluorescent protein fused to the C terminus of RAD51 specifically interferes with secondary DNA binding by the RAD51-ssDNA complex
Genes Genet Syst.2014
Pubmed ID: 25747041
38. Kagawa, W., Arai, N., Ichikawa, Y., Saito, K., Sugiyama, S., Saotome, M., Shibata, T., and Kurumizaka, H.
Functional analyses of the C-terminal half of the Saccharomyces cerevisiae Rad52 protein
Nucleic Acids Res.2014
Pubmed ID: 24163251 責任著者、[領域内共同研究 香川・胡桃坂]
39. Ichikawa, Y., Morohashi, N., Nishimura, Y., Kurumizaka, H., and Shimizu, M.
Telomeric repeats act as nucleosome-disfavouring sequences in vivo
Nucleic Acids Res.2014
Pubmed ID: 24174540 責任著者
40. Hayashi-Takanaka, Y., Stasevich, T. J., Kurumizaka, H., Nozaki, N., and Kimura, H.
Evaluation of chemical fluorescent dyes as a protein conjugation partner for live cell imaging
PLoS One.2014
Pubmed ID: 25184362 [領域内共同研究 胡桃坂・木村]
41. Arimura, Y., Shirayama, K., Horikoshi, N., Fujita, R., Taguchi, H., Kagawa, W., Fukagawa, T., Almouzni, G., and Kurumizaka, H.
Crystal structure and stable property of the cancer-associated heterotypic nucleosome containing CENP-A and H3.3
Sci Rep.2014
Pubmed ID: 25408271 責任著者、[領域内共同研究 香川・胡桃坂]
42. Al Abo, M., Dejsuphong, D., Hirota, K., Yonetani, Y., Yamazoe, M., Kurumizaka, H., and Takeda, S.
Compensatory functions and interdependency of the DNA-binding domain of BRCA2 with the BRCA1-PALB2-BRCA2 complex
Cancer Res.2014
Pubmed ID: 24285729
43. Yokoyama, H., Yamashita, T., Horikoshi, N., Kurumizaka, H., and Kagawa, W.
Crystallization and preliminary X-ray diffraction analysis of the secreted protein Athe_0614 from Caldicellulosiruptor bescii
Acta Crystallogr Sect F Struct Biol Cryst Commun.2013
Pubmed ID: 23545654
44. Uanschou, C., Ronceret, A., Von Harder, M., De Muyt, A., Vezon, D., Pereira, L., Chelysheva, L., Kobayashi, W., Kurumizaka, H., Schlogelhofer, P., and Grelon, M.
Sufficient amounts of functional HOP2/MND1 complex promote interhomolog DNA repair but are dispensable for intersister DNA repair during meiosis in Arabidopsis
Plant Cell.2013
Pubmed ID: 24363313
45. Shima, H., Suzuki, H., Sun, J., Kono, K., Shi, L., Kinomura, A., Horikoshi, Y., Ikura, T., Ikura, M., Kanaar, R., Igarashi, K., Saitoh, H., Kurumizaka, H., and Tashiro, S.
Activation of the SUMO modification system is required for the accumulation of RAD51 at sites of DNA damage
J Cell Sci.2013
Pubmed ID: 24046452 [領域内共同研究 胡桃坂・田代]
46. Sato, Y., Mukai, M., Ueda, J., Muraki, M., Stasevich, T. J., Horikoshi, N., Kujirai, T., Kita, H., Kimura, T., Hira, S., Okada, Y., Hayashi-Takanaka, Y., Obuse, C., Kurumizaka, H., Kawahara, A., Yamagata, K., Nozaki, N., and Kimura, H.
Genetically encoded system to track histone modification in vivo
Sci Rep.2013
Pubmed ID: 23942372
  [領域内共同研究 胡桃坂・山縣・木村]
※注目の論文に取り上げられた
47. Morozumi, Y., Ino, R., Ikawa, S., Mimida, N., Shimizu, T., Toki, S., Ichikawa, H., Shibata, T., and Kurumizaka, H.
Homologous pairing activities of two rice RAD51 proteins, RAD51A1 and RAD51A2
PLoS One.2013
Pubmed ID: 24124491 責任著者
48. Kanda, T., Horikoshi, N., Murata, T., Kawashima, D., Sugimoto, A., Narita, Y., Kurumizaka, H., and Tsurumi, T.
Interaction between basic residues of Epstein-Barr virus EBNA1 protein and cellular chromatin mediates viral plasmid maintenance
J Biol Chem.2013
Pubmed ID: 23836915
49. Iwasaki, W., Miya, Y., Horikoshi, N., Osakabe, A., Taguchi, H., Tachiwana, H., Shibata, T., Kagawa, W., and Kurumizaka, H.
Contribution of histone N-terminal tails to the structure and stability of nucleosomes
FEBS Open Bio.2013
Pubmed ID: 24251097 責任著者、[領域内共同研究 香川・胡桃坂]
50. Horikoshi, N., Sato, K., Shimada, K., Arimura, Y., Osakabe, A., Tachiwana, H., Hayashi-Takanaka, Y., Iwasaki, W., Kagawa, W., Harata, M., Kimura, H., and Kurumizaka, H.
Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2
Acta Crystallogr D Biol Crystallogr 69, 2431-2439, 2013
Pubmed ID: 24311584 責任著者、[領域内共同研究 香川・原田・木村・胡桃坂]
51. Azegami, N., Saikusa, K., Todokoro, Y., Nagadoi, A., Kurumizaka, H., Nishimura, Y., and Akashi, S.
Conclusive evidence of the reconstituted hexasome proven by native mass spectrometry
Biochemistry.2013
Pubmed ID: 23879667
52. Arimura, Y., Kimura, H., Oda, T., Sato, K., Osakabe, A., Tachiwana, H., Sato, Y., Kinugasa, Y., Ikura, T., Sugiyama, M., Sato, M., and Kurumizaka, H.
Structural basis of a nucleosome containing histone H2A.B/H2A.Bbd that transiently associates with reorganized chromatin
Sci Rep.2013
Pubmed ID: 24336483 責任共著者、[領域内共同研究 木村・小田・杉山・胡桃坂]
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