15. Available plasmids (You cannot see maps of plasmids with Internet Explorer. Please use other blowers.)

Plasmids are available upon request to Mitsuyasu Hasebe (mhasebe@nibb.ac.jp). Most plasmids are distributed before publication as a volunteer for convenience of Physco friends without any funds.

 

We found that 7133 promoter we has been used has a sequence of 7113 promoter. The original plasmid we obtained from Drs. Mitsuhara and Ohashi has the 7113 plasmid with a label of 7133 on the tube. Therefore all plasmids we used in my laboratory as 7133 should be 7113.

 

1. Plasmids for gene disruption

No

Name

marker

comment

1

pTN3

nptII

G418 resistant cassette

2

pTN80

nptII

Modified nptII cassette

3

pTN81

nptII

Modified nptII cassette

4

pTN82

nptII

Floxed modified nptII cassette

5

pTN182

nptII

Floxed modified nptII cassette, MCS variant

6

pTN86

aph4

Floxed modified aph4 cassette

7

pTN186

aph4

Floxed modified aph4 cassette, MCS varinat

8

p35S-Zeo

ble

Zeocin resistant cassette

9

p35S-loxP-Zeo

zeocin

Floxed modified zeocin resistant cassette

10

p35S-loxP-BSD

Blastcidin S

Floxed modified blastcidin S resistant cassette

 

2. Plasmids for a reporter gene assay

No

Name

reporter

marker

comment

1

pTN83

uidA

nptII

Modified nptII cassette: to fuse GUS to a C terminal

2

pTN84

uidA

nptII

Floxed modified nptII cassette: to fuse GUS to a C terminal

3

pTN85

uidA

nptII

GUS (M1L), Floxed modified nptII cassette: to fuse GUS to a C terminal

4

pGFPmutNPTII

gfp

nptII

GFP(M1L): to fuse GFP to a C terminal

5

pYHG2

gfp

aph4

GFP(M1L): to fuse GFP to a C terminal

6

plinkerYHG2

gfp

aph4

GFP(M1L), linker sequence just before GFP;@ to fuse GFP to a C terminal

7

pHIZ2

gfp

Ble

GFP(M1L): to fuse GFP to a C terminal

8

pHIZ3

gfp

ble

to fuse GFP to a N terminal

9

pCTRN-NPTII2

citrine

nptII

To fuse citrine to either terminal

 

3. Plasmids for overexpression analysis

No

Name

Promoter

marker

Target site

Comment & references

1

pPpMADS2-7113

E7113

nptII

PpMAD2

@

2

pPpMADS2-7113 rev

E7113

nptII

PpMAD2

 

3

pPphb7-7113

E7113

nptII

Pphb7

 

4

pPphb7-7113 rev

E7113

nptII

Pphb7

 

5

pTFH9119

Actin

nptII

PpMAD2

 

6

pPpMADS2-Actin rev

Actin

nptII

PpMAD2

 

7

pTN90

Actin

nptII

Pphb7

 

8

pTFH15.3

Actin

nptII

Pphb7

 

9

pZAG1

Actin

ble

213 locus

GFP-fusion

10

pMAK1

7113

ble

213 locus

 

11

pCMAK1

7113

ble

213 locus

 

12

pTFH38.9N

CaMV35S

ble

213 locus

mRFP-fusion

13

pTFH38.9C

CaMV35S

ble

213 locus

mRFP-fusion

14

pKS2

Actin

nptII

 

GFP-fusion

15

pActN-GFP

Actin

nptII

 

GFP-fusion

16

pTFH22.4

Actin

nptII

GFP

 

 

17

pTKM1

Actin

None

 

Transient expression