Instruments

List of instruments in the Trans-Omics Facility（2021.5）

▶ Analysis
▶ Separations
▶ Mass spectrometers
▶ Spectrometers
▶ Imaging

▶ Balance room (Common124)
▶ Cleaning room (Common131、352)
▶ Accessories

Please click blue triangles for details.

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Analysis

Instruments	Models	Room number
Protein sequencer	ABI Procise 494 HT ABI Procise 492 cLC	Common 112
Isoelectric focusing electrophoresis instrumentation	AmershamBiotech IPGphor	Yamate No.3 Bldg. 5F East
Particle gun	BIO-RAD PDS-1000/He	351
Next-generation sequencer	Oxford Nanopore GridION illumina NextSeq 550 illumina HiSeq 1500 illumina MiSeq PacBio Sequel PacBio Sequel IIe	Common 142 Common 145 Common144
Robotics	CaliperLifesciences Sciclone NGS WorkStation QIAGEN QIAgility Formulatrix Mantis	Common 132 Common 143
Real time PCR	ABI 7500 RealTimePCR System Thermo Fisher QuantStudio 3 FLUiDIGM Biomark HD	Common 132 Yamate No.3 Bldg. 5F East
Digital PCR	Life technologies QuantStudio 3D	Common 132
Bioanalyzer	Agilent 2100 Bioanalyzer(2unit) Agilent 2200 TapeStation	Common 132 Common 143
Thermal cycler	ABI GeneAmp PCR System 9700(4unit) Biometra T Gradient Thermal cycler 96 Life technologies ProFlex	Common 142 Common 132
Automated Plasmid isolation system	KURABO PI-50α KURABO PI-50	352 Yamate No.3 Bldg. 5F East
Automated DNA isolation system	KURABO PI-480	352
Nucleic acid purification system	QIAGEN QIAcube Promega Maxwell RSC	Common 132
Electrophoresis Power Supply	SageScience Pippin Pulse CHEF MAPPER	Common 144 Common 132
DNA size selection system	SageScience Pippin Prep SageScience Blue pippin	Common 144
Automated DNA size selection	SageScience SAGE HLS	Common 144
DNA shearing system	Diagenode Megaruptor 3	Common 144
Tissue・Cell breakage tabletop fusion	YASUI KIKAI MULTI-BEADS SHOCKER KURABO SH-48	Common 132 352
Shaking incubator	KURABO CS-16 TAITEC Bioshaker BR-300LF(2unit)	352 351
Hybridization incubator	TAITEC HB-100	Common 132
DNA Microarray	Agilent Microarray Scanner with Surescan High Resolution Technology	Common 132
Clean Zone Device	KOACH T500-F	Common 143
DNA Shearing System	M&S Instruments Covaris S2 M&S Instruments Covaris M220	Common 132

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Separation

INSTRUMENTS	MODELS	ROOM NUMBER
Flow Cytometer	SONY Cell Sorter SH800 BD FACS AriaⅡ	Common1 B10 Yamate No.3 Bldg. 5F East
C1 Single Cell Auto Prep	Fludigm C1 system 10X Genomics Chromium	Yamate No.3 Bldg. 5F East Common 142
Vacuum freeze dryer	TAITEC VD-800F(2unit) TAITEC VD-800F	Common B12 Yamate No.3 Bldg. 5F East
Centrifugal thickener	Tomy CC-105 Tomy CC-100 Thermo Fisher scientific Savant SpeedVac SPD1010 Tomy CC-101	Common B12 Common 140 Yamate No.3 Bldg. 5F East
Desktop ultracentrifuge	Beckman Optima TLX	352
Separatory ultracentrifuge	Beckman Optima L-80XP Beckman XL-90 Beckman J2-21M/E	Yamate No.3 Bldg. 5F East 352 352
Small utility centrifuge	HITACHI CF15RX II HITACHI CF16RX	Common 140 Common 142
High speed refrigerated micro centrifuge	Tomy MDX-310	Common 140
Micro purification system	Pharmacia SMART System	Common 123
High-performance liquid chromatograph	Waters UPLC Waters alliance Waters 600E(2unit)	Common 123
Liquid chromatograph	Amersham Biosciences AKTA explorer	Common 123
Gas chromatograph	SHIMADZU GC-2010 plusAF SHIMADZU GC-14APF SC	Common B11

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Mass spectrometer

INSTRUMENTS	MODELS	ROOM NUMBER
LC-MS	AB SCIEX TripleTOF® 5600 system Thermo Fisher Scientific Orbitrap Elite	Common 113

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Spectrometer

INSTRUMENTS	MODELS	ROOM NUMBER
Double wavelength/double beam spectrophotometer (ultraviolet・visible)	HITACHI 557	Common B21
Spectrophotometer (ultraviolet・visible)	NanoDrop ND-2000C NanoDrop ND-8000	Common132
Fluorometer	Life technologies Qubit ThermoFisher Qubit 4	Common 142
Fourier transform infrared spectrophotometer	HORIBA FT-730	Common 123
Multi grating microplate reader	Perkin Elmer Nivo CORONA SH-9000Lab	Common B10
Fluorescence spectrophotometer (ultraviolet・visible)	HITACHI F-4500	Common B21

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Imaging

INSTRUMENTS	MODELS	ROOM NUMBER
Laser capture microdissection system	BM EQUIPMENT ArcturusXT	Common B20
Generalized image analyzer	GE Healthcare Typhoon FLA-9000	Common B11 Yamate No.3 Bldg. 5F East
Chemiluminescent image analyser	FUJIFILM LAS3000mini	351 Yamate No.3 Bldg. 5F East
Gel photo booth	ATTO AE-6933FXCF	Common 132
Imaging system	BIO-RAD ChemiDoc XRS+	Common 132
System Microscope	OLYMPUS BX53	Common B20

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Balance room（Common124）

INSTRUMENTS	MODELS
Micro-electric balance	METTLER TOLEDO MX5
Analytical balance	METTLER TOLEDO XPE 205 DRV
Chemical balance	METTLER TOLEDO PB303

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Cleaning room（Common131）

INSTRUMENTS	MODELS
pH meter	Mettler Toledo FiveEasy
Ice maker	Coenelius
Dry heat sterilizer	ADVANTEC STA420DA
Drying Oven	Yamato Scientific DR200
Milli-Q	MILLIPORE Academic A10

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352

INSTRUMENTS	MODELS
Automatic glass washer	HAMO
Dry heat sterilizer	Yamato scientific DS600
Autoclave unit (2unit)	TOMY BS325

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Accessories

INSTRUMENTS	MODELS
Hematothermal circulator	Neslab RTE-8
Osciloscope	SONY・Tektronix 475
Digital thermistor	TAKARAKOGYO D211
Digital surface thermometer	ANRITSU HL-260
Rotary evaporator	Yamato Scientific RE-46C
Heat bloc	ASTEC BI-516H

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