基礎生物学研究所 細胞動態研究部門

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研究業績
Publications

  1. 原著論文
  2. 総説・著書

原著論文

原著論文 2018

  1. Muro, K., Matsuura-Tokita, K., Tsukamoto, R., Kanaoka, M.M., Ebine, K., Higashiyama, T., Nakano, A. and Ueda, T. (2018) ANTH domain-containing proteins are required for the pollen tube plasma membrane integrity via recycling ANXUR kinases. Commun Biol, 1:152, doi: 10.1038/s42003-018-0158-8
  2. Fujimoto, M., Sazuka, T., Oda, Y., Kawahigashi, H., Wu, J., Takanashi, H., Ohnishi, T., Yoneda, J., Ishimori, M., Kajiya-Kanegae, H., Hibara, K., Ishizuna, F., Ebine, K., Ueda, T., Tokunaga, T., Iwata, H., Matsumoto, T., Kasuga, S., Yonemaru, J. and Tsutsumi, N. (2018) Transcriptional switch for programmed cell death in pith parenchyma of sorghum stems. Proc Natl Acad Sci USA., 201807501, doi: https://doi.org/10.1073/pnas.1807501115
  3. Kurusu, T., Mitsuka, D., Yagi, C., Kitahata, N., Tsutsui, T., Ueda, T., Yamamoto, Y., Negi, J., Iba, K., Betsuyaku, S. and Kuchitsu, K. (2018) Involvement of S-type anion channels in disease resistance against an oomycete pathogen in Arabidopsis seedling. Commun. Integr. Biol., DOI:10.1080/19420889.2018.1495007
  4. Ito, E., Ebine, K., Choi, S., Ichinose, S., Uemura, T., Nakano, A. and Ueda, T. (2018) Integration of Two RAB5 Groups during Endosomal Transport in Plants. eLife, eLife 2018;7:e34064, DOI: 10.7554/eLife.34064
  5. Takemoto, K., Ebine, K., Askani, j.C., Krüger, F., Gonzalez, Z.A., Ito, E., Goh, T., Schumacher, K., Nakano, A., Ueda, T. (2018) Distinct sets of tethering complexes, SNARE complexes, and Rab GTPases mediate membrane fusion at the vacuole in Arabidopsis. Proc Natl Acad Sci USA., 115: E2457-E2466, doi:https://doi.org/10.1073/pnas.1717839115
  6. Minamino, N., Kanazawa, T., Era, A., Ebine, K., Nakano, A., Ueda, T. (2018) RAB GTPases in the basal land plant Marchantia polymorpha. Plant Cell Phys., 59: 845-856, doi: https://doi.org/10.1093/pcp/pcy027

原著論文 2017

  1. Sánchez-Rodríguez, C., Yanyun Shi, Y., Kesten, C., Zhang, D., Sancho-Andrés, G., Ivakov, A., Lampugnani, E.R., Sklodowski, K., Fujimoto, M., Nakano, A., Bacic, A., Wallace, I.S., Ueda, T., van Damme, D., Zhou, Y. and Persson, S. (2017) The cellulose synthases are cargo of the TPLATE adaptor complex. Mol. Plant, 11: 346-349, doi: http://dx.doi.org/10.1016/j.molp.2017.11.012
  2. Bowman, J.L., Kohchi, T., Yamato, K.T., Jenkins, J., Shu, S., Ishizaki, K., Yamaoka, S., Nishihama, R., Nakamura, Y., Berger, F., Adam, C., Aki, S.S., Althoff, F., Araki, T., Arteaga-Vazquez, M.A., Balasubrmanian, S., Barry, K., Bauer, D., Boehm, C.R., Briginshaw, L., Caballero-Perez, J., Catarino, B., Chen, F., Chiyoda, S., Chovatia, M., Davies, K.M., Delmans, M., Demura, T., Dierschke, T., Dolan, L., Dorantes-Acosta, A.E., Eklund, D.M., Florent, S.N., Flores-Sandoval, E., Fujiyama, A., Fukuzawa, H., Galik, B., Grimanelli, D., Grimwood, J., Grossniklaus, U., Hamada, T., Haseloff, J., Hetherington, A.J., Higo, A., Hirakawa, Y., Hundley, H.N., Ikeda, Y., Inoue, K., Inoue, S., Ishida, S., Jia, Q., Kakita, M., Kanazawa, T., Kawai, Y., Kawashima, T., Kennedy, M., Kinose, K., Kinoshita, T., Kohara, Y., Koide, E., Komatsu, K., Kopischke, S., Kubo, M., Kyozuka, J., Lagercrantz, U., Lin, S.S., Lindquist, E., Lipzen, A.M., Lu, C.W., De Luna, E., Martienssen, R.A., Minamino, N., Mizutani, M., Mizutani, M., Mochizuki, N., Monte, I., Mosher, R., Nagasaki, H., Nakagami, H., Naramoto, S., Nishitani, K., Ohtani, M., Okamoto, T., Okumura, M., Phillips, J., Pollak, B., Reinders, A., Rövekamp, M., Sano, R., Sawa, S., Schmid, M.W., Shirakawa, M., Solano, R., Spunde, A., Suetsugu, N., Sugano, S., Sugiyama, A., Sun, R., Suzuki, Y., Takenaka, M., Takezawa, D., Tomogane, H., Tsuzuki, M., Ueda, T., Umeda, M., Ward, J.M., Watanabe, Y., Yazaki, K., Yokoyama, R., Yoshitake, Y., Yotsui, I., Zachgo, S., and Schmutz, J. (2017) Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. Cell, 171: 287-304, doi: http://dx.doi.org/10.1016/j.cell.2017.09.030
  3. Matsui, H., Nomura, Y., Egusa, M., Hamada, T., Hyon, GS., Kaminaka, H., Watanabe, Y., Ueda,, T., Trujillo, M., Shirasu, K., and Nakagami, H. (2017) The GYF domain protein PSIG1 dampens the induction of cell death during plant-pathogen interactions. PLOS Genet., 13: e1007037, doi: 10.1371/journal.pgen.1007037
  4. Ung, H., Karia, P., Ebine, K., Ueda, T., Yoshioka, K., and Moeder, W. (2017) Triphosphate Tunnel Metalloenzyme Function in Senescence Highlights a Biological Diversification of This Protein Superfamily. Plant Phys., 175: 473-485, doi:10.1104/pp.17.00700
  5. Inada, N., Ebine, K., Ito, E., Nakano, A., and Ueda, T. (2017) Constitutive activation of plant-specific RAB5 GTPase confers increased resistance against adapted powdery mildew fungus. Plant Biotech., 34: 89-95, doi:10.5511/plantbiotechnology.17.0501a
  6. Ito, Y., Toyooka, K., Fujimoto, M., Ueda, T., Uemura, T. and Nakano A. (2017) The trans-Golgi network and the Golgi stacks behave independently during regeneration after Brefeldin A treatment in tobacco BY-2 cells. Plant Cell Phys., 58: 811-821, doi:10.1093/pcp/pcx028
  7. Minamino, N., Kanazawa, T., Nishihama, R., Yamato, K.T., Ishizaki, K., Kohchi, T., Nakano, A. and Ueda, T. (2017) Dynamic reorganization of the endomembrane system during spermatogenesis in Marchantia polymorpha. J. Plant Res., 130: 433-441, doi:10.1007/s10265-017-0909-5
  8. Cui, Y., Zhao, Q., Xie, HT.,Wong, WS., Gao, C., Ding, Y., Tan, Y., Ueda, T., Zhang, Y. and Jiang, L. (2017) MON1/CCZ1-mediated Rab7 activation regulates tapetal programmed cell death and pollen development in Arabidopsis. Plant Phys., 173:206-218, doi: http://dx.doi.org/10.1104/pp.16.00988
  9. Akita, K., Kobayashi, M., Sato, M., Kutsuna, N., Ueda, T., Toyooka, K., Nagata, N., Hasezawa, S., and Higaki, T. (2017) Cell wall accumulation of fluorescent proteins derived from a trans-Golgi cisternal membrane marker and paramural bodies in interdigitated apoplastic space in Arabidopsis leaf epidermis. Protoplasma, 254: 367-377, doi:10.1007/s00709-016-0955-1

原著論文 2016

  1. Mbengue, M., Bourdais, G., Gervasi, F., Beck, M., Zhou, J., Spallek, T., Bartels, S., Boller, T., Ueda, T., Kuhn, H. and Robatzek, S. (2016) Clathrin-dependent endocytosis is required for immunity mediated by pattern recognition receptor kinases. Proc Natl Acad Sci USA., 113: 11034-11039, doi: 10.1073/pnas.1606004113
  2. Yoshinari, A., Fujimoto, M., Ueda, T., Inada, N., Naito, S. and Takano, J. (2016) DRP1-dependent Endocytosis Is Essential for Polar Localization and Boron-induced Degradation of the Borate Transporter BOR1 in Arabidopsis thaliana. Plant Cell Phys., 57: 1985-2000, doi: 10.1093/pcp/pcw121
  3. Sakurai, H., Inoue, T., Nakano, A. and Ueda, T. (2016) ENDOSOMAL RAB EFFECTOR WITH PX-DOMAIN, an Interacting Partner of RAB5 GTPases, Regulates Membrane Trafficking to Protein Storage Vacuoles in Arabidopsis. Plant Cell, 26: 1490-0503, doi: 10.1105/tpc.16.00326
  4. Inada, N., Betsuyaku, S., Shimada, T., Ebine, K., Ito, E., Kutsuna, N., Hasezawa, S., Takano, Y., Fukuda, H., Nakano, A., and Ueda, T. (2016) Modulation of plant RAB GTPase-mediated membrane trafficking pathway at the interface between plants and obligate biotrophic pathogens. Plant Cell Phys., 57: 1854-1864, doi: 10.1093/pcp/pcw107
  5. Wu, X., Ebine, K., Ueda, T. and Qiu, Q. (2016) AtNHX5 and AtNHX6 are Required for the Subcellular Localization of the SNARE Complex that Mediates the Trafficking of Seed Storage Proteins in Arabidopsis. PLoS ONE, 11(3): e0151658, doi: 10.1371/journal.pone.0151658
  6. Ito, E., Uemura, T., Ueda, T. (corresponding author), and Nakano, A. (2016) Distribution of RAB5-positive multivesicular endosomes and the trans-Golgi network in root meristematic cells of Arabidopsis thaliana. Plant Biotech. 33: 281-286, doi: 10.5511/plantbiotechnology.16.0218a
  7. Sunada, M., Goh, T., Ueda, T. (corresponding author) and Nakano, A. (2016) Functional analyses of the plant-specific C-terminal region of VPS9a: the activating factor for RAB5 in Arabidopsis thaliana. J. Plant Res., 129: 93-102, doi: 10.1007/s10265-015-0760-5
  8. Kanazawa, T., Era, A., Minamino, N., Shikano, Y., Fujimoto, M., Uemura, T., Nishihama, R., Yamato, K.T., Ishizaki, K., Nishiyama, T., Kohchi, T., Nakano, A. and Ueda, T. (2016) SNARE Molecules in Marchantia polymorpha: Unique and Conserved Features of the Membrane Fusion Machinery. Plant Cell Phys., 57: 307-324, doi: 10.1093/pcp/pcv076

原著論文 2011 - 2015

  1. Chanoca, A., Kovinich, N., Burkel, B., Stecha, S., Bohorquez-Restrepo, A., Ueda, T., Eliceiri, KW., Grotewold, E. and Otegui, MS. (2015) Anthocyanin Vacuolar Inclusions Form by a Microautophagy Mechanism. Plant Cell, 27: 2545-2559, doi: http://dx.doi.org/10.1105/tpc.15.00589
  2. Wen, L., Fukuda, M., Sunada, M., Ishino, S., Ishino, Y., Okita, W.T., Ogawa, M., Ueda, T. and Kumamaru, T. (2015) Guanine nucleotide exchange factor 2 for Rab5 proteins coordinated with GLUP6/GEF regulates the intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm. J. Exp. Bot., 66: 6137-6147, doi: 10.1093/jxb/erv325
  3. Tsutsui, T., Nakano, A. and Ueda, T. (2015) The plant-specific RAB5 GTPase ARA6 is required for starch and sugar homeostasis in Arabidopsis thaliana. Plant Cell Phys. 56: 1073-1083, doi: 10.1093/pcp/pcv029
  4. Hoepflinger, M.C., Geretschlaeger, A., Sommer, A., Hoeftberger, M., Tenhaken, R., Ueda, T., and Foissner, I. (2015) Molecular analysis and localization of CaARA7 a conventional RAB5 GTPase homolog from characean algae. Traffic, 16: 534-554, doi: 10.1111/tra.12267
  5. Fujimoto, M., Suda, Y., Vernhettes, S., Nakano, A. and Ueda, T. (2015) Phosphoinositides have distinct roles in intracellular trafficking of the cellulose synthase complex in Arabidopsis thaliana. Plant Cell Phys., 56: 287-298, doi:10.1093/pcp/pcu195 (selected as Editor-in-Chief’s Choice)
  6. Ebine, K., Inoue, T., Ito, J., Ito, E., Uemura T., Goh, T., Abe, A., Sato, K., Nakano, A., and Ueda, T. (2014) Plant vacuolar trafficking occurs through distinctly regulated pathways. Curr. Biol., 24: 1375-1382, doi: 10.1016/j.cub.2014.05.004
  7. Cui, Y., Zhao, Q., Gao, C., DingY., Zeng, Y., Ueda, T., Nakano, A., and Jiang, L. (2014) Rab7 activation by the MON1-CCZ1 complex is essential for PVC-to-vacuole trafficking and plant growth in Arabidopsis, Plant Cell., 26: 2080-2097, doi: http://dx.doi.org/10.1105/tpc.114.123141
  8. Hoepflinger, M., Hametner, C., Ueda, T. and Foissner I. (2014) Vesicular trafficking in characean green algae and the possible involvement of a VAMP72-family protein. Plant Signaling & Behavior, e28466, doi: 10.4161/psb.28466
  9. Kawai-Toyooka, H., Mori, T., Hamaji, T., Suzuki, M., Olson, BJSC., Uemura, T., Ueda, T., Nakano, A., Toyoda, A., Fujiyama, A. and Nozaki, H. (2014) Sex-specific Post-translational Regulation of the Gamete Fusogen GCS1 in the Isogamous Volvocine Alga Gonium pectoral. Eukaryotic Cell, 13: 648-656, doi: 10.1128/EC.00330-13
  10. Fujiwara, M., Uemura, T., Ebine, K., Nishimori, Y., Ueda, T., Nakano, A., Sato, MH. and Fukao, Y. (2014) Interactomics of Qa-SNARE in Arabidopsis thaliana. Plant Cell Phys. 55: 781-789, doi: 10.1093/pcp/pcu038
  11. Hashiguchi, Y., Yano, D., Nagafusa, K., Kato, T., Saito, C., Uemura, T., Ueda, T., Nakano, A., Tasaka, M. and Morita, MT (2014) A unique HEAT repeat-containing protein SHOOT GRAVITROPISM 6 is involved in vacuolar membrane dynamics in gravity sensing cells of Arabidopsis inflorescence stem. Plant Cell Phys. 55, 811-822, doi: 10.1093/pcp/pcu020
  12. Uemura, T., Suda, Y., Ueda, T. and Nakano, A. (2014) Dynamic behavior of the trans-Golgi network in root tissues of Arabidopsis revealed by super-resolution live imaging. Plant Cell Phys. 55, 694-703, doi: 10.1093/pcp/pcu010
  13. Hoepflinger, M., Geretschlaeger, A., Hoeftberger, M., Sommer, A., Nishiyama, T., Sakayama, Hammerl, P., H., Tenhaken, R., Ueda, T., Foissner I. (2013) Molecular and biochemical analysis of the first ARA6 homolog, a Rab5 GTPase, from green algae. J. Exp. Bot. 64, 5553-68, doi: 10.1093/jxb/ert322
  14. Nakamura, H., Xue, Y., Miyakawa, T., Hou, F., Qin, H., Fukui, K., Shi, X., Ito, E., Park, S., Miyauchi, Y., Asano, A., Totsuka, N., Ueda, T., Tanokura, M., and Asami, T. (2013) Molecular mechanism of strigolactone perception by DWARF14. Nat. Commun. 4: 2613 doi: 10.1038/ncomms3613
  15. Inoue, T., Kondo, Y., Naramoto, S., Nakano, A., and Ueda, T. (2013) RAB5 activation is required for multiple steps in Arabidopsis thaliana root development. Plant Cell Phys. 54, 1648-1659, doi: 10.1093/pcp/pct109
  16. Asaoka, R., Uemura, T., Nishida, S., Fujiwara, T., Ueda T. and Nakano, A. (2013) New insights into the role of RABA1 GTPases in salinity stress tolerance. Plant Signaling & Behavior, e25377 doi: 10.4161/psb.25377
  17. Jia, T., Gao, C., Cui, Y., Wang, J., Ding, Y., Cai, Y., Ueda, T., Nakano, A. and Jiang, L. (2013) ARA7(Q69L) expression in transgenic Arabidopsis cells induces the formation of enlarged multivesicular bodies. J. Exp. Bot. 64, 2817-29, doi: 10.1093/jxb/ert125
  18. Fukuda, M., Wen, L., Satoh-Cruz, M., Kawagoe, Y., Nagamura, Y., Okita, TW., Washida, H., Sugino, A., Ishino, S., Ishino, Y., Ogawa, M., Sunada, M., Ueda, T., and Kumamaru, T. (2013) A guanine nucleotide exchange factor for Rab5 proteins is essential for intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm. Plant Phys. 162: 663-674, doi: http:/ / dx. doi. org/ 10. 1104/ pp. 113
  19. Choi, S., Tamaki, T., Ebine, K., Uemura, T., Ueda, T. (corresponding author), and Nakano, A. (2013) RABA members act in distinct steps of subcellular trafficking of the FLAGELLIN SENSING 2 receptor. Plant Cell, 25; 1174-1187, doi: http://dx.doi.org/10.1105/tpc.112.108803
  20. Uejima, T., Ihara, K., Sunada, M., Kawasaki, M., Ueda, T., Kato, R., Nakano, A., and Wakatsuki, S. (2013) Direct metal recognition by guanine nucleotide exchange factor in the initial step of exchange reaction. Acta Cryst. D. 69: 345-351, doi:10.1107/S0907444912047294
  21. Asaoka, R., Uemura, T., Ito, J., Fujimoto, M., Ito, E., Ueda, T., and Nakano, A. (2013) RABA1 GTPases are involved in transport between the trans-Golgi network and the plasma membrane, and are required for salinity stress tolerance. Plant J. 73:240-249, DOI: 10.1111/tpj.12023
  22. Era, A., Kutsuna, N., Higaki, T., Hasezawa S., Nakano, A., and Ueda, T. (2013) Microtubule stability affects the unique motility of F-actin in Marchantia polymorpha. J. Plant Res., 126, 113-119, DOI: 10.1007/s10265-012-0496-4
  23. Ebine, K., Uemura, T., Nakano, A., and Ueda, T. (2012) Flowering time modulation by a vacuolar SNARE via FLOWERING LOCUS C in Arabidopsis thaliana. PLoS ONE, 7 (7): e442239, DOI: 10.1371/journal.pone.0042239
  24. Uemura, T., Ueda, T., and Nakano, A. (2012) The physiological role of SYP4 in the abiotic stress response. Plant Signaling & Behavior, 7: 1118-1120, DOI: 10.4161/psb.21307
  25. Ito, Y., Uemura, T., Shoda, K., Fujimoto, M., Ueda, T., and Nakano, A. (2012) cis-Golgi proteins accumulate near the ER exit sites and act as the scaffold for Golgi regeneration after brefeldin A treatment in tobacco BY-2 cells. Mol. Biol. Cell, 23: 3203-3214, DOI: 10.1091/mbc.E12-01-0034
  26. Nielsen, ME., Feechan, A., Böhlenius, H., Ueda, T., and Christensen, HT. (2012) The Arabidopsis ARF-GEF, GNOM, mediates transport required for innate immunity and focal accumulation of PEN1. Proc Natl Acad Sci USA., 109: 11443-11448, DOI: 10.1073/pnas.1117596109
  27. Higaki, T., Kutsuna, N., Hosokawa, Y., Akita, K., Ebine, K., Ueda, T., Kondo, N., and Hasezawa, S. (2012) Statistical organelle dissection of Arabidopsis guard cells using image database LIPS. Sci. Rep., DOI: 10.1038/srep00405
  28. Uemura, T., Kim, H., Saito, C., Ebine, K., Ueda, T., Schulze-Lefert, P., and Nakano, A. (2012) Qa-SNAREs localised to the trans-Golgi network regulate multiple transport pathways and extracellular disease resistance in plants. Proc Natl Acad Sci USA., 109: 1784-1789, DOI: 10.1073/pnas.1115146109
  29. Ebine, K., Miyakawa, N., Fujimoto, M., Uemura, T., Nakano, A., and Ueda, T. (2012) An endosomal trafficking pathway regulated by the plant-unique RAB5, ARA6. Small GTPases, 3: 1-5, http://www.landesbioscience.com/journals/smallgtpases/article/18299/
  30. Ito, E., Fujimoto, M., Ebine, K., Uemura, T., Ueda, T. (corresponding author) and Nakano A. (2012) Dynamic behavior of clathrin in Arabidopsis thaliana unveiled by live imaging. Plant J., 69: 204-216, DOI: 10.1111/j.1365-313X.2011.04782.x
  31. Minamisawa, N., Sato, M., Cho, KH., Ueno, H., Takechi, K., Kajikawa, M., Yamato, KT., Ohyama, K., Toyooka, K., Kim, GT., Horiguchi, G., Takano, H., Ueda, T., and Tsukaya, H. (2011) ANGUSTIFOLIA, a plant homolog of CtBP/BARS, functions outside the nucleus. Plant J., 68: 788-799, DOI: 10.1111/j.1365-313X.2011.04731.x
  32. Saito, C., Uemura, T., Awai, C., Ueda, T., Abe, H. and Nakano, A. (2011) Qualitative difference between "bulb" membranes and other vacuolar membranes. Plant Signaling & Behavior, 6: 1914-1917, DOI: 10.4161/psb.6.12.18061
  33. Saito, C., Uemura, T., Awai, C., Tominaga, M., Ebine, K., Ito, J., Ueda, T., Abe, H., Morita, MT., Tasaka, M. and Nakano, A. (2011) The occurrence of bulbs, a complex configuration of the vacuolar membrane, is affected by mutations of vacuolar SNARE and phospholipase in Arabidopsis. Plant J., 68: 67-73, DOI: 10.1111/j.1365-313X.2011.04665.x
  34. Ebine, K., Fujimoto, M., Okatani, Y., Nishiyama, T., Goh, T., Ito, E., Dainobu, T., Nishitani, A., Uemura, T., Sato, MH., Thordal-Christensen, H., Tsutsumi, N., Nakano, A., and Ueda, T. (2011) A membrane trafficking pathway regulated by the plant-specific RAB GTPase ARA6. Nat. Cell Biol., 13: 853-860, DOI: 10.1038/ncb2270

原著論文 2010以前の重要なもの

  1. Naramoto, S., Kleine-Vehna, J., Robert, S., Fujimotoc, M., Dainobu, T., Paciorekd, T., Ueda, T., Nakano, A., Van Montagu, M.C.E., Fukuda, H., and Friml, J. (2010) ADP-ribosylation factor (ARF), guanine nucleotide exchange factor (GEF), and GTPase-activating protein (GAP) function in endocytosis of plant cells. Proc Natl Acad Sci USA., 107: 21890-21895, DOI: 10.1073/pnas.1016260107
  2. Uemura, T., Morita, TM., Ebine, K., Okatani, Y., Yano, D., Saito, C., Ueda, T., and Nakano, A. (2010) Vacuolar/prevacuolar compartment Qa-SNAREs, VAM3/SYP22 and PEP12/SYP21 have interchangeable functions in Arabidopsis. Plant J., 64: 864-873, DOI: 10.1111/j.1365-313X.2010.04372.x
  3. Fujimoto, M., Arimura, S., Ueda, T., Takanashi, H., Hayashi, Y., Nakano, A. and Tsutsumi, N. (2010) Arabidopsis dynamin-related proteins DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. Proc Natl Acad Sci USA., 107: 6094-6099, DOI: 10.1073/pnas.0913562107
  4. Chen, L., Hamada, S., Fujiwara, M., Zhu, T., Thao, NP., Wong, HL., Krishna, P., Ueda, T., Kaku, H., Shibuya, N., Kawasaki, T., and Shimamoto, K. (2010) The Hop/Sti1-Hsp90 Chaperone Complex Facilitates the Maturation and Transport of a PAMP Receptor in Rice Innate Immunity. Cell Host Microbe, 7: 185-196, DOI: 10.1016/j.chom.2010.02.008
  5. Boutté, Y., Rosa, MSF., Men, S., Chow, C., Ebine, K., Gustavsson, A., Johansson, L., Ueda, T., Moore, I., Jürgens, G., Grebe, M. (2010) Endocytosis Restricts Arabidopsis KNOLLE Syntaxin To The Cell Division Plane During Late Cytokinesis. EMBO J., 29: 546-558, DOI: 10.1038/emboj.2009.363
  6. Era, A., Tominaga, M., Ebine, K., Awai, C., Saito, C., Ishizaki, K., Yamato, TK., Kohchi, T., Nakano, A., and Ueda, T. (2009) Application of Lifeact Reveals F-Actin Dynamics in Arabidopsis thaliana and the Liverwort, Marchantia polymorpha. Plant Cell Physiol., 50: 1041-1048, DOI: 10.1093/pcp/pcp055 (paper of the month in “The Illuminate Plant Cell”, http://www.illuminatedcell.com/Home.html)
  7. Ebine, K., Okatani, Y., Uemura, T., Goh, T., Shoda, K., Niihama, M., Morita, MT., Spitzer, C., Otegui, MS., Nakano, A. and Ueda, T. (2008) A SNARE complex unique to seed plants is required for protein storage vacuole biogenesis and seed development of Arabidopsis thaliana. Plant Cell, 20: 3006-3021
  8. Goh, T., Uchida, W., Arakawa, S., Ito, E., Dainobu, T., Ebine, K., Takeuchi, M., Sato, K., Ueda, T. (corresponding author) and Nakano, A. (2007) VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for development of Arabidopsis thaliana. Plant Cell, 19: 3504-3515
  9. Haas, TJ., Sliwinski, MK., Martinez, DE., Preuss, M., Ebine, K., Ueda, T., Nielsen, N., Odorizzi, G. and Otegui, MS. (2007) The Arabidopsis AAA ATPase SKD1 is involved in multivesicular endosome function and interacts with its positive regulator LIP5. Plant Cell, 19: 1295-1312
  10. Ueda, T., Uemura, T., Sato, M.H. and Nakano A. (2004) Functional differentiation of endosomes in Arabidopsis cells. Plant J., 40: 783-789.
  11. Grebe, M., Xu, J., Möius, W., Ueda, T., Nakano, A., Geuze, H.J., Rook, M.B. and Scheres, B. (2003) Arabidopsis sterol endocytosis involves actin-mediated trafficking via Ara6-positive early endosomes. Curr. Biol., 13: 1378-1387.
  12. Geldner, N., Anders, N., Wolters, H., Keicher, J., Kornberger, W., Muller, P., Delbarre, A., Ueda, T., Nakano, A. and Jürgens, G. (2003) The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport and auxin-dependent plant growth. Cell, 112: 219-230.
  13. Takeuchi, M., Ueda, T., Yahara, N. and Nakano, A. (2002) Arf1 GTPase plays roles in the protein traffic between the endoplasmic reticulum and the Golgi apparatus in tobacco and Arabidopsis cultured cells. Plant J., 31: 499-515.
  14. Saito, C., Ueda, T., Abe, H., Wada, Y., Kuroiwa, T., Hisada, A., Furuya, M. and Nakano, A. (2002) A complex and mobile structure forms a distinct subregion within the continuous vacuolar membrane in young cotyledons of Arabidopsis. Plant J., 29: 245-255.
  15. Morita, M.T., Kato, T., Nagafusa, K., Saito, C., Ueda, T., Nakano, A. and Tasaka, M. (2002) Involvement of the Vacuoles of the Endodermis in the Early Process of Shoot Gravitropism in Arabidopsis. Plant Cell, 14: 47-56.
  16. Ueda, T., Yamaguchi, M., Uchimiya, H. and Nakano, A. (2001) Ara6, a plant-unique novel type Rab GTPase, functions in the endocytic pathway of Arabidopsis thaliana. EMBO J., 20: 4730-4741.
  17. Yahara, N., Ueda, T., Sato, K. and Nakano, A. (2001) Multiple roles of Arf1 GTPase in the yeast exocytic and endocytic pathways. Mol. Biol. Cell, 12: 221-238.
  18. Takeuchi, M., Ueda, T., Sato, K., Abe, H., Nagata, T. and Nakano, A. (2000) A dominant negative mutant of Sar1 GTPase inhibits protein transport from the endoplasmic reticulum to the Golgi apparatus in tobacco and Arabidopsis cultured cells. Plant J., 23: 517-525.
  19. Ueda, T., Matsuda, N., Uchimiya, H. and Nakano, A. (2000) Modes of interaction between the Arabidopsis Rab protein, Ara4, and its putative regulator molecules revealed by a yeast expression system. Plant J., 21: 341-349.
  20. Ueda, T., Matsuda, N., Anai, T., Tsukaya, H., Uchimiya, H. and Nakano, A. (1996) An Arabidopsis gene isolated by a novel method for detecting genetic interaction in yeast encodes the GDP dissociation inhibitor of Ara4 GTPase. Plant Cell, 8: 2079-2091.

総説・著書

英文総説

  1. Kanazawa, T. and Ueda, T. (2017) Exocytic trafficking pathways in plants: why and how they are redirected. New Phytol., 215:952-957. doi: 10.1111/nph.14613.
  2. Bowman, J. L., Araki, T., Arteaga-Vazquez, M. A., Berger, F., Dolan, L., Haseloff, J., Ishizaki, K., Kyozuka, J., Lin, S., Nagasaki, H., Nakagami, H., Nakajima, K., Nakamura, Y., Ohashi-Ito, K., Sawa, S., Shimamura, M., Solano, R., Tsukaya, H., Ueda, T., Watanabe, Y., Yamato, K. T., Zachgo, S. and Kohchi, T. (2016) The naming of names: guidelines for gene nomenclature in Marchantia. Plant Cell Phys., 57: 257-261, DOI: 10.1093/pcp/pcv193
  3. Ebine, K., and Ueda, T. (2015) Roles of membrane trafficking in plant cell wall dynamics. Front. Plant Sci., doi: 10.3389/fpls.2015.00878
  4. Uemura, T. and Ueda, T. (2014) Plant vacuolar trafficking driven by RAB and SNARE proteins. Curr. Opin. Plant Biol. 22: 116-121, DOI: 10.1016/j.pbi.2014.10.002
  5. Ueda, T. (2014) Cellulase in Cellulose Synthase: A Cat among the Pigeons? Plant Phyiol., 165: 1397-1398. DOI: http://dx.doi.org/10.1104/pp.114.245753
  6. Inada, N. and Ueda, T. (2014) Membrane Trafficking Pathways and their Roles in Plant-Microbe Interactions. Plant Cell Phys. 55: 672-686, DOI: 10.1093/pcp/pcu046
  7. Ito, E. and Ueda, T. (2014) Analysis of Rab GTPase-effector interaction in endosomal trafficking by bimolecular fluorescence complementation. Methods in Molecular Biology, 1209: 97-105, DOI: 10.1007/978-1-4939-1420-3_7
  8. Ueda, T., Sato, M.H., and Uemura, T. (2012) The role of Rab GTPases and SNARE proteins in plant endocytosis and post-Golgi trafficking. Endocytosis in Plants, Edited by Jozef Samaj, Springer, 201-216. DOI: 10.1007/978-3-642-32463-5_10
  9. Fujimoto, M. and Ueda, T. (2012) Conserved and plant-unique mechanisms regulating plant post-Golgi traffic. Front. Plant Sci., 3: 197. DOI: 10.3389/fpls.2012.00197
  10. Saito, C. and Ueda, T. (2009) Function of RAB and SNARE members in plant life. Int. Rev. Cell Mol. Biol., 274: 183-233, DOI: 10.1016/S1937-6448(08)02004-2
  11. Ebine, K. and Ueda T. (2009) Unique mechanism of plant endocytic/vacuolar transport pathways. J. Plant Res., 122: 21-30, DOI: 10.1007/s10265-008-0200-x
  12. Nielsen, E., Cheung, A.Y. and Ueda, T. (2008) The Regulatory RAB and ARF GTPases for Vesicular Trafficking. Plant Phys., 147: 1516-1526
  13. Ueda, T. and Nakano, A. (2002) Vesicular traffic: an integral part of plant life. Curr. Opin. Plant Biol., 5: 513-517.
  14. Ueda, T. and Nakano, A. (2001) Plant-unique system for the regulation of endocytic pathway. RIKEN Rev., 41: 88-89.
  15. Uchimiya, H., Anai, T., Aspuria, E.T., Matsui, M., Nakano, A. and Ueda, T. (1998) The biological roles of small GTPases and interacting proteins in plants. J. Plant Res., 111: 257-260.

和文総説

  1. 海老根一生,上田貴志(2015)細胞壁の構築・維持と膜交通システム.植物の生長調節.Vol.50: 43-49
  2. 藤本優,上田貴志 (2014) 膜交通経路の多様性獲得機構から見た植物のポストゴルジ輸送網. 植物科学の最前線(BSJ-Review)Vol. 5: 3-20
  3. 恵良厚子,上田貴志(2012)ゼニゴケ細胞生物学.植物科学の最前線(BSJ-Review)Vol. 3: 114-121
  4. 藤本優,上田貴志(2012)細胞壁資材の細胞内輸送-植物の膜交通と細胞壁-.遺伝.Vol. 66: 47-52,エヌ・ティー・エス
  5. 海老根一生,上田貴志(2011)陸上植物固有の膜交通制御因子が植物の新たな細胞内輸送経路を開拓した.ライフサイエンス新着論文レビュー. http://first.lifesciencedb.jp/archives/3119 ライフサイエンス統合データベースセンター.
  6. 上田貴志(2010)植物のSNARE複合体と膜融合.生体の科学.Vol. 61: 269-275(財)金原一郎記念医学医療振興財団/医学書院
  7. 上田貴志(2008)植物のエンドサイトーシス. 蛋白質核酸酵素増刊号 メンブレントラフィックの奔流.pp2295-2300 共立出版
  8. 上田貴志(2004)オーキシンの輸送メカニズム. 植物細胞工学シリーズ20.新版 植物ホルモンのシグナル伝達. pp52-59 秀潤社
  9. 上田貴志(2003)高等植物における小胞輸送研究 〜多様な高次機能発現における普遍的分子装置の役割を探る〜,実験医学増刊号14 細胞内輸送の最前線,pp142-146,羊土社
  10. 上田貴志(2002)植物細胞におけるエンドサイトーシス,植物細胞工学シリーズ17,植物オルガネラの分化と多様性,pp77-84,秀潤社 (2002)

著書

  1. DOJIN BIOSCIENCEシリーズ メンブレントラフィック 福田光則,吉森保編(分担執筆)化学同人
  2. 植物細胞壁実験法 石井忠,石水毅,梅澤俊明,加藤陽治,岸本崇生,小西照子,松永俊朗編(分担執筆)
  3. 植物細胞壁 —基礎と応用— 西谷和彦,梅澤俊明編(分担執筆)
  4. 進化学辞典 日本進化学会編(分担執筆)
  5. 東大式現代科学用語ナビ キーワードでわかるサイエンスの「いま」 東京大学理学系研究科・理学部編(分担執筆)
  6. 植物の細胞を観る実験プロトコール新版 顕微鏡観察の基本から最新バイオイメージング技術まで 福田裕穂,西村幹夫,中野明彦編,秀潤社(分担執筆)
  7. モデル植物の実験プロトコール改訂第3版 イネ・シロイヌナズナ・ミヤコグサ編,島本功,岡田清孝,田畑哲之編,秀潤社(分担執筆)
  8. GFPとバイオイメージング 蛍光タンパク質の発現と検出の基本から生体機能の可視化まで 宮脇敦史編,羊土社(分担執筆)
  9. 朝倉植物生理学講座第一巻,植物細胞,西村幹夫編,朝倉書店(分担執筆)2002年
  10. 細胞生物学事典,朝倉書店(分担執筆)
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