- Advanced proteomics to define protein function and dynamic regulation -
This is a 3-day practical course combining hands-on training and lectures. Students will learn essential skills in proteomic sample preparation, LC-MS/MS instrument method development, quantitative proteomics analysis, and data interpretation. In the hands-on training, students will focus on sample preparation for whole proteome and proximity labeling quantitative mass spectrometry analysis. The students will take these datasets through guided, hands-on bioinformatics tutorials utilizing open-source software platforms to perform quantitative and functional analysis. Course lectures will cover a range of topics, from the basics of LC-MS/MS instrumentation to emerging proteomics technologies, including protein complex analysis, spatially restricted proteomes, near single cell samples, and bioinformatic strategies for data analysis and biological interpretation. We are pleased to have Prof. Ileana Cristea and Dr. Todd Greco from Princeton University, and Prof. Hidetaka Kosako from Tokushima University who are world-leading scientists in this field, to give intensive lectures and experimental instruction on mass-spectrometry and bioinformatics, and proximity labeling analyses.
May 15th, 2024, Proteomics Lecture I; Preparation of experimental samples;
May 16th, Proteomics Lecture II; LS-MS/MS analysis;
May 17th, Proteomics Lecture III, Data analysis
National Institute for Basic Biology (NIBB) (Okazaki, Aichi, Japan)
Hidetaka Kosako (Tokushima Univ.); Ileana Cristea and Todd Greco (Princeton Univ.)
Shuji Sigenobu, Takuya Yoshida, Tomoko Mori and Yumiko Makino (NIBB); Hidetaka Kosako, Kohei Nishino (Tokushima Univ.); Ileana Cristea and Todd Greco (Princeton Univ.)
Basic molecular biology knowledge/techniques are required.
English
Free for registration; around JPY 3,000 for banquet
Please note that travel expenses are NOT supported.
30 participants (maximum)
Naoto Ueno and Shuji Shigenobu (NIBB); Hidetaka Kosako (Tokushima Univ.), Ileana Cristea (Princeton Univ.)
A selection may be held if there are more applicants than the course size. We will let you know the result until April 15 (Mon) by e-mail.
For the online Application Form please use this link:
April 8th, 2024
proteomics_course2024@nibb.ac.jp (Takuya Yoshida, NIBB)