for Collaborative / Cooperative research (imaging facility)@
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 Orginal Papers

(91) Yanase, R., Nishigami, Y., Ichikawa, M., Yoshihisa, T., Sonobe, S. (2018). The neck deformation of Lacrymaria olor depending upon cell states. J. Protistol. 51, 1–6. Olympus FV1000 ack s17-503 t  

(90) Ishikawa, T., Eto, K., Kim, S. K., Wake, H., Takeda, I., Horiuchi, H., Moorhouse, A. J., Ishibashi, H. and Nabekura, J. (2018). Cortical astrocytes prime the induction of spine plasticity and mirror image pain. Pain (in press) yPubMedzNicon A1 ack  

(89) Hasugata, R., Hayashi, S., Kawasumi-Kita, A., Sakamoto, J., Kamei, Y. and Yokoyama, H. (2018).Infrared laser-mediated single-cell-level gene induction in the regenerating tail of Xenopus laevis tadpoles. Cold Spring Harb. Protoc. (in press)yPubMedzIR-LEGO ack s16-509, 17-505 t  

(88) Tominaga, J., Nakahara, Y., Horikawa, D., Tanaka, A., Kondo, M., Kamei, Y., Takami, T., Sakamoto, W., Unno, K., Sakamoto, A. and Shimada, H. (2018). Overexpression of the protein disulfide isomerase AtCYO1 in chloroplasts slows darkinduced senescence in Arabidopsis. Plant Biol. 18, 80 yPubMedzHitachi H-7600 ack s15-372 t

(87) Koshimizu, S., Kofuji, R., Sasaki-Sekimoto, Y., Kikkawa, M., Shimojima, M., Ohta, H., Shigenobu, S., Kabeya, Y., Hiwatashi, Y., Tamada, Y., Murata, T. and Hasebe, M. (2018). Physcomitrella MADS-box genes regulate water supply and sperm movement for fertilization.
Nature Plants 4, 36-45
yPubMedzNicon A1,  Olympus SZX16 ack  

(86) Hattori M, Tamada Y, Murata T, Oya S, Hasebe M, Hayano Y and Kamei Y. (2017) Artificial testing targets with controllable blur for adaptive optics microscopes. Optical Engineering 56, 08502 Olympus IX71 ack   

(85) Fujikawa, A., Sugawara, H., Tanaka, T., Matsumoto, M., Kuboyama, K., Suzuki, R., Tanga, N., Ogata, A., Masumura, M., and Noda, M. (2017). Targeting PTPRZ inhibits stem cell-like properties and tumorigenicity in glioblastoma cells. Sci. Rep. 7, 5609. yPubMedzKeyence BZ8000  ack  

(84) Kuboyama, K., Tanga, N., Suzuki, R., Fujikawa, A., and Noda, M. (2017).  Protamine neutralizes chondroitin sulfate proteoglycan-mediated inhibition of oligodendrocyte differentiation. PLoS ONE 12, e0189164. yPubMedzKeyence BZ8000J. ack  

(83) Hayashi, M., Tanaka, M. Yamamoto, S., Nakagawa, T., Kanai, M., Anegawa, A., Ohnishi, M., Mimura, T., and Nishimura, M. (2017).Plastidial folate prevents starch biosynthesis triggered by sugar influx into non-photosynthetic plastids of Arabidopsis. Plant Cell Physiol58, 1328-1338. yPubMedzHitachi H-7600 ack s15-340 t 

(82) Kanai, M., Mano, S., and Nishimura, M. (2017). An efficient method for the isolation of highly purified RNA from seeds for use in quantitative transcriptome analysis. J. Vis. Exp. 119, e55008.yPubMedzOlympus SZX16 ack  

(81) Nakahata, Y., Eto, K., Murakoshi, H., Watanabe, M., Kuriu, T., Hirata, H., Moorhouse, A. J., Ishibashi, H. and Nabekura, J. (2017). Activation-Dependent Rapid Postsynaptic Clustering of Glycine Receptors in Mature Spinal Cord Neurons. eNeuro. 4(1) e0194-16.2017yPubMedzNicon A1 ack    

(80) Aoki, K., Kondo, Y., Naoki, H., Hiratsuka, T., Itoh, R.E., and Matsuda, M. (2017).
Propagating Wave of ERK Activation Orients Collective Cell Migration. Dev. Cell 43, 305–317.e5. yPubMedzOlympus FV1200 ack  

(79) Mii, Y., Yamamoto, T., Takada, R., Mizumoto, S., Matsuyama, M., Yamada, S., *Takada, S., and *Taira, M. (*Co-corresponding authors) (2017).
Roles of two types of heparan sulphate clusters in Wnt8 distribution and signalling in Xenopus.
Nature Commun. 8, 1973.
Nicon A1 ack

(78) Taniguchi, A., Kimura, Y., Mori, I., Nonaka, S. and Higashijima, S. I. (2017).
Axially-confined in vivo single-cell labeling by primed conversion using blue and red lasers with conventional confocal microscopes.
Dev. Growth Differ. 59, 741-748
yPubMedzOlympus FV1200 ack

(77) Iida, T., Iwata, Y., Mohri, T., Baba, S. A. and Hirohashi, N. (2017).
A coordinated sequence of distinct flagellar waveforms enables a sharp flagellar turn mediated by squid sperm pH-taxis.
Sci Rep. 7, 12938.
zNikon A1 ack

(76) Suzuki, M., Sato, M., Koyama, H., Hara, Y., Hayashi, K., Yasue, N., Imamura, H., Fujimori, T., Nagai, T., Campbell, R.E. and Ueno, N. (2017).
Distinct intracellular Ca2+ dynamics regulate apical constriction and differentially contribute to neural tube closure.
Development. 144, 1307-1316.yPubMedzNikon A1 ack

(75) Li, C., Sako, Y., Imai, A., Nishiyama, T., Thompson, K., Kubo, M., Hiwatashi, Y., Kabeya, Y., Karlson, D., Wu, S. H., Ishikawa, M., Murata, T., Benfey, P. N., Sato, Y., Tamada, Y. and Hasebe, M. (2017).
A Lin28 homologue reprograms differentiated cells to stem cells in the moss Physcomitrella patens.
Nature Commun. (in press) yPubMedzNikon A1 ack

(74) Nakano, M., Arai Y, Kotera, I., Okabe, K., Kamei, Y. & Nagai, T.(2017)
Genetically encoded ratiometric fluorescent thermometer with wide range and rapid response
PLoS One yPubMed
zIR-LEGO,  SZX16 ack s12-378, 13-330, 14-348, 15-343, 16-520t

(73) Osanai, Y., Shimizu, T., Mori, T., Yoshimura, Y., Hatanaka, N., Nambu, A., Kimori, Y., Koyama, S., Kobayashi, K. and Ikenaka, K. (2016).
Rabies virus-mediated oligodendrocyte labeling reveals a single oligodendrocyte myelinates axons from distinct brain regions.
Glia 65, 93-105 yPubMedzNikon A1 ack s15-332 t

(72) Numaga-Tomita, T., Kitajima, N., Kuroda, T., Nishimura, A., Miyano, K., Yasuda, S., Kuwahara, K., Sato, Y., Ide, T., Birnbaumer, L., TRPC3-GEF-H1 axis mediates pressure overload-induced cardiac fibrosis.
Sci. Rep. 6, 39383yPubMedzNikon A1  ack

(71) Session, A. M., Uno, Y., Kwon, T., Chapman, J. A., Toyoda, A., Takahashi, S., Fukui, A., Hikosaka, A., Suzuki, A., Kondo, M., van Heeringen, S. J., Quigley, I., Heinz, S., Ogino, H., Ochi, H., Hellsten, U., Lyons, J. B., Simakov, O., Putnam, N., Stites, J., Kuroki, Y., Tanaka, T., Michiue, T., Watanabe, M., Bogdanovic, O., Lister, R., Georgiou, G., Paranjpe, S. S., van Kruijsbergen, I., Shu, S., Carlson, J., Kinoshita, T., Ohta, Y., Mawaribuchi, S., Jenkins, J., Grimwood, J., Schmutz, J., Mitros, T., Mozaffari, S. V., Suzuki, Y., Haramoto, Y., Yamamoto, T. S., Takagi, C., Heald, R., Miller, K., Haudenschild, C., Kitzman, J., Nakayama, T., Izutsu, Y., Robert, J., Fortriede, J., Burns, K., Lotay, V., Karimi, K., Yasuoka, Y., Dichmann, D. S., Flajnik, M. F., Houston, D. W., Shendure, J., DuPasquier, L., Vize, P. D., Zorn, A. M., Ito, M., Marcotte, E. M., Wallingford, J. B., Ito, Y., Asashima, M., Ueno, N., Matsuda, Y., Veenstra, G. J., Fujiyama, A., Harland, R.M., Taira, M. and Rokhsar, D. S. (2016).
Genome evolution in the allotetraploid frog Xenopus laevis.
Nature 538, 336–343.yPubMedzNikon A1  

(70) Negishi, T., Miyazaki, N., Murata, K., Yasuo, H., and Ueno, N. (2016).
Physical association between a novel plasma-membrane structure and centrosome orients cell division.
Biochim Biophys eLife e16550. yPubMedzNikon A1 ack 

(69) Sakamaki, K., Ishii, T.M., Sakata, T., Takemoto, K., Takagi, C., Takeuchi, A., Morishita, R., Takahashi, H., Nozawa, A., Shinoda, H., Chiba, K., Sugimoto, H., Saito, A., Tamate, S., Satou, Y., Jung, S.K., Matsuoka, S., Koyamada, K., Sawasaki. T., Nagai, T., and Ueno, N. (2016).
Dysregulation of a potassium channel, THIK-1, targeted by caspase-8 accelerates cell shrinkage.
Biochim Biophys Acta. 1863, 2766-2783. yPubMedzNikon A1 

(68) Inoue, Y., Suzuki, M., Watanabe, T., Yasue, N., Takeo, I., Adachi, T., and Ueno, N. (2016).
Mechanical roles of apical constriction, cell elongation, and cell migration during neural tube formation in Xenopus.
Biomech Model Mechanobiol. 15, 1733-1746.yPubMedzNikon A1 ack 

(67) Suzuki, M., Takagi, C., Miura, S., Sakane, Y., Suzuki, M., Sakuma, T., Sakamoto, N., Endo, T., Kamei, Y., Sato, Y., Kimura, H., Yamamoto, T., Ueno, N., and Suzuki, K.T. (2016).
In vivo tracking of histone H3 lysine 9 acetylation in Xenopus laevis during tail regeneration.
Genes Cells 21, 358-369.yPubMedzNikon A1 ack 

(66) Fujikawa, A., Nagahira, A., Sugawara, H., Ishii, K., Imajo, S., Matsumoto, M., Kuboyama, K., Suzuki, R., Tanga, N., Noda, M., Uchiyama, S., Tomoo, T., Ogata, A., Masumura, M., and Noda, M. (2016).
Small-molecule inhibition of PTPRZ reduces tumor growth in a rat model of Glioblastoma.
Sci. Rep. 6, 20473.yPubMedzKeyence-BZ8000 ack

(65) Kuboyama, K., Fujikawa, A., Suzuki, R., Tanga, N., and Noda, M. (2016).
Role of chondroitin sulfate (CS) modification in the regulation of protein tyrosine phosphatase receptor type Z (PTPRZ) activity: Pleiotrophin-PTPRZ-A signaling is involved in oligodendrocyte differentiation.
J. Biol. Chem. 291, 18117-18128.yPubMedzKeyence-BZ8000 ack

(64) Koyama, H., Shi, D., Suzuk,i M., Ueno, N., Uemura, T. and Fujimori, T. (2016).
Mechanical Regulation of Three-Dimensional Epithelial Fold Pattern Formation in the Mouse Oviduct.
Biophys J. 111,650-665 yPubMedzNikon A1 ack

(63) Shi, D., Usami, F., Komatsu, K., Oka, S., Abe, T., Uemura, T. and Fujimori, T. (2016).
Dynamics of planar cell polarity protein Vangl2 in the mouse oviduct epithelium.
Mech Dev. 141,78-89 yPubMedzNikon A1 ack

(62) Zeng, C. W., Kamei, Y., Wang, C.T. and Tsai, H. J. (2016).
Subtypes of hypoxia-responsive cells differentiate into neurons in spinal cord of zebrafish embryos after hypoxic stress.
Biol. Cell 108,357–377.yPubMedzIR-LEGO ack s15-332 t
 This paper was selected as a cover art.

(61) Yokoyama, R., Yamamoto, H., Kondo, M., Takeda, S., Ifuku, K., Fukao, Y., Kamei, Y., Nishimura, M. and Shikanai, T. (2016).
Grana-localized proteins, RIQ1 and RIQ2, affect the organization of light-harvesting complex II and grana
Plant Cell 28, 2261–2275.yPubMedzTEM(H-7600)  ack s14-378 t

(60) Okada, K., Inohaya, K., Mise, T., Kudo, A., Takada, S. and Wada, H. (2016).
Reiterative expression of pax1 directs pharyngeal pouch segmentation in medaka.
Development.143, 1800-10.yPubMedzLeica SP8 ack

(59) Tsuzuki, S., Handa, Y., Takeda, N. and Kawaguchi, M. (2016).
Strigolactone-induced putative secreted protein 1 is required for the establishment of symbiosis by the arbuscular mycorrhizal fungus Rhizophagus irregularis.
Mol Plant Microbe Interact. 29, 277-86. yPubMedzNikon A1 ack

(58) Numaga-Tomita, T., Nishida, M., Putney, J. W. Jr. and Mori, Y. (2016).
TRPC3 amplifies B-cell receptor-induced ERK signalling via protein kinase D-dependent Rap1 activation.
Biochem J. 473, 201-10.yPubMedzNikon A1 

(57) Hashimoto, H., Ishino, Y., Jiang, W., Yoshimura, T., Takeda-Uchimura, Y., Uchimura, K., Kadomatsu, K. and Ikenaka, K. (2016).
Keratan sulfate regulates the switch from motor neuron to oligodendrocyte generation during development of the mouse spinal cord.
Neurochem Res. 41, 450-62.yPubMedzNikon A1 ack

(56) Kagawa N., Honda, A., Zenno, A., Omoto, R., Imanaka, S., Takehana, Y. and Naruse, K. (2016).
Arginine vasotocin neuronal development and its projection in the adult brain of the medaka.
Neurosci. Lett. 613, 47-53.yPubMedzLeica SP8 

(55) Kanai, M., Mano, S., Kondo, M., Hayashi, M. and Nishimura, M. (2015)..
Extension of oil biosynthesis during the mid-phase of seed development enhances oil content in Arabidopsis seeds.
Plant Biotechnol J. 14, 1241-50.yPubMedzOlympus SZX16

(54) Nishihama, R., Ishida, S., Urawa, H., Kamei, Y. and Kohchi, T. (2016)
Conditional Gene Expression/Deletion Systems for Marchantia polymorpha Using its Own Heat-Shock Promoter and Cre/loxP-Mediated Site-Specific Recombination.
Plant Cell Physiol. 57, 271-280. doi:10.1093/pcp/pcv102. y
 IR-LEGO ack

(53) Hatanaka,Y., Namikawa, T., Yamauchi, K. and Kawaguchi, Y. (2015).
Cortical divergent projections in mice originate from two sequentially generated, distinct populations of excitatory cortical neurons with different initial axonal outgrowth characteristics.
Cereb. Cortex doi: 10.1093/cercor/bhv077 yPubMedzNikon A1, Zeiss LSM5DUO ack

(52) Suzuki, M., Takagi, C., Miura, S., Sakane, Y., Suzuki, M., Sakuma, T., Sakamoto, N., Endo, T., Kamei, Y., Sato, Y., Kimura, H., Yamamoto, T., Ueno, N. and Suzuki, K. (2016).
In vivo tracking of histone H3 lysine 9 acetylation in Xenopus laevis during tail regeneration.
Genes to Cells 21, 358-69.yPubMedzLeica M205FA, Olympus SZX16  ack s15-379, 14-391 t

(51) Kametani, Y., Chi, N. C., Stainier, D. Y. and Takada, S. (2015).
Notch signaling regulates venous arterialization during zebrafish fin regeneration.
Genes Cells. 20, 427-38.yPubMedzNikon A1 ack

(50) Sadakane, O., Masamizu, Y., Watakabe, A., Terada, S., Ohtsuka, M., Takaji, M., Mizukami, H., Ozawa, K., Kawasaki, H., Matsuzaki, M. and Yamamori, T. (2015).
Long-term two-photon calcium imaging of neuronal populations with subcellular resolution in adult non-human primates.
Cell Rep. 13, 1989-99.yPubMedzNikon A1, Olympus FVMPE-RS  ack

(49) Sadakane, O., Watakabe, A., Ohtsuka, M., Takaji, M., Sasaki, T., Kasai, M., Isa, T., Kato, G., Nabekura, J., Mizukami, H., Ozawa, K., Kawasaki, H. and Yamamori, T. (2015)
In vivo two-photon imaging of dendritic spines in marmoset neocortex(1,2,3).
eNeuro. 2015 Sep 17;2(4).  doi: 10.1523/ENEURO.0019-15.2015.yPubMedzLeica SP8  ack

(48) Kawasumi-Kita, A., Hayashi, T., Kobayashi, T., Nagayama, C., Hayashi, S., Kamei, Y., Morishita, Y., Takeuchi, T., Tamura, K. and Yokoyama, H. (2015)
Application of local gene induction by infrared laser-mediated microscope and temperature stimulator to amphibian regeneration study.
Dev. Growth Differ. 57, 601-613. yPubMedzIR-LEGO ack press release (NIBB)(CollaborativeResearch)s12-367,13-347,13-373,13-384,14-330,14-350,14-352t

(47) Kuboyama, K., Fujikawa, A., Suzuki, R. and Noda, M. (2015)
Inactivation of Protein Tyrosine Phosphatase Receptor Type Z by Pleiotrophin Promotes Remyelination through Activation of Differentiation of Oligodendrocyte Precursor Cells.
J Neurosci. 35, 12162-71  yPubMedzKeyence-BZ8000 ack press release (NIBB)

(46) Nakashima, M., Suzuki, M., Saida, M., Kamei, Y., Hossain, M.B. and Tokumoto, T. (2015)
Cell-based assay of nongenomic actions of progestins revealed inhibitory G protein coupling to membrane progestin receptor ƒ¿ (mPRƒ¿).
Steroids 100, 21–26. yPubMedzLuminescence microscope(Olympus BX61WI with ImagEM) ack s14-341t

(45) Sakurai, F., Hamasaka, G. and Uozumi, Y. (2015).
Development of an aquacatalytic system based on the formation of vesicles of an amphiphilic palladium NNC-pincer complex.
Dalton Trans. 44, 7826-7854. yPubMedzNikon A1, Keyence BZ8000 

(44) Takeda, N., Handa, Y., Tsuzuki, S., Kojima, M., Sakakibara, H., and Kawaguchi, M. (2015).
Gibberellins interfere with symbiosis signaling and gene expression, and alter colonization by arbuscular mycorrhizal fungi in Lotus japonicus.
Plant Physiol. 167, 545-57. yPubMedzNikon A1 ack

(43) Okuyama, T., Yokoi, S., Abe, H., Isoe, Y., Suehiro, Y., Imada, H., Tanaka, M., Kawasaki, T., Yuba, S., Taniguchi, Y., Kamei, Y., Okubo, K., Shimada, A., Naruse, K., Takeda, H., Oka, Y., Kubo, T. and Takeuchi, H. (2014).
A neural mechanism underlying mating preferences for familiar individuals in medaka fish.
Science 34, :91-94.yPubMedzIR-LEGO acks10-104t(Šî¶Œ¤‹¤“¯—˜—pŒ¤‹†¬‰Êjpress release (“Œ‘å)

(42) Shibata, M., Oikawa, K., Mano, S., and Nishimura, M. (2014).
Measurement of the number of peroxisomes.
Bio-Protoc. 4, e1284. yJournal sitezNikon A1

(41) Hira, R., Ohkubo, F., Masamizu, Y., Ohkura, M., Nakai, J., Okada, T., and Matsuzaki, M. (2014).
Reward-timing-dependent bidirectional modulation of cortical microcircuits during optical single neuron operant conditioning.
Nature Commun. 5, 5551.  yPubMedzOlympus FV1000 ack

(40) Suzaki, T., Ito, M., Yoro, E., Sato, S., Hirakawa, H. Takeda, N., and Kawaguchi, M. (2014).
Endoreduplication- mediated initiation of symbiotic organ development in Lotus japonicus.
Development 141, 2441-2445. yPubMedzNikon A1 ack

(39) Yoro, E., Suzaki, T., Toyokura, K., Miyazawa, H., Fukaki, H., and Kawaguchi, M. (2014).
A positive regulator of nodule organogenesis, NODULE INCEPTION, acts as a negative regulator of rhizobial infection in Lotus japonicus.
Plant Physiol.165,747-758. yPubMedzNikon A1 ack

(38) Ishino Y, Hayashi Y, Naruse M, Tomita K, Sanbo M, Fuchigami T, Fujiki R, Hirose K, Toyooka Y, Fujimori T, Ikenaka K, Hitoshi S. (2014).
Bre1a, a histone H2B ubiquitin ligase, regulates the cell cycle and differentiation of neural precursor cells.
J Neurosci., 34, 3067-3078. yPubMedzNikon A1 ack

(37) Okada T., Akita T., Sato-Numata K., Islam Md. R., Okada Y. (2014).
A newly cloned ClC-3 isoform, ClC-3d, as well as ClC-3a mediates Cd2+-sensitive outwardly rectifying anion currents.
Cell Physiol Biochem. 33:539-556. yPubMedzNikon A1 ack

(36) Hayashi-Tsugane, M., Takahara, H., Ahmed, N., Himi, E., Takagi, K., Iida, S., Tsugane, K., and Maekawa, M. (2014).
A mutable albino allele in rice reveals that formation of thylakoid membranes requires SNOW-WHITE LEAF1 gene.
Plant Cell Physiol. 55, 3-15. yPubMedzKeyence BZ8000

(35) Shi, D., Komatsu, K., Hirao, M., Toyooka, Y., Koyama, H., Tissir, F., Goffinet, A. M., Uemura, T. and Fujimori, T. (2014).
Celsr1 is required for the generation of polarity at multiple levels of the mouse oviduct.
Development 141, 4558-4568. yPubMedzNikon A1 ack

(34) Hayashi, S., Ochi, H., Ogino, H., Kawasumi, A., Kamei, Y., Tamura, K.and Yokoyama, H. (2014).
Transcriptional regulators in the Hippo1 signaling pathway control organ growth in Xenopus tadpole tail regeneration.
Dev. Biol. 396, 31-41. yPubMedzIR-LEGO ack
) press release(NIBB)(CollaborativeResearch)s12-367, 13-347, 14-330t

(33) Masamizu, Y., Tanaka, Y. R., Tanaka, Y. H., Hira, R., Ohkubo, F., Kitamura, K., Isomura, Y., Okada, T. and Matsuzaki, M. (2014).
Two distinct layer-specific dynamics of cortical ensembles during learning of a motor task.
Nat. Neurosci. 17, 7, 987-994 yPubMedzLSM5DUO ack press release (NIBB)

(32) Tamada, Y., Murata, T., Hattori, M., Oya, S., Hayano, Y., Kamei, Y. and Hasebe, M. (2014).
Optical property analyses of plant cells for adaptive optics microscopy.
International Journal of OptomechatronicsNikon A1, Olympus BX63 ack

(31) Goto-Yamada, S., Mano, S., Nakamori, C., Kondo, M., Yamawaki, R., Kato, A. and Nishimura, M. (2014).
Chaperone and protease functions of LON protease 2 modulate the peroxisomal transition and degradation with autophagy.
Plant Cell Physiol.55(3):482-96. y
PubMedzNikon A1 ack

(30) Hara, Y., Nagayama, K., Yamamoto, T.S., Matsumoto, T., Suzuki, M. and Ueno, N. (2013).
Directional migration of leading-edge mesoderm generates physical forces: Implication in Xenopus notochord formation during gastrulation.
Dev Biol. 15, 382(2), 482-95. yPubMedzNikon A1 ack

(29) Ishibashi, H., Yamaguchi, J., Nakahata, Y. and Nabekura, J. (2013).
Dynamic regulation of glycine-GABA co-transmission at spinal inhibitory synapses by neuronal glutamate transporter.
J. Physiol
.591,16, 3821-3832. PubMedzNikon A1 ack

(28) Shibata, M., Oikawa, K.,  Yoshimoto, K., Kondo, M., Mano, S., Yamada, K., Hayashi, M., Sakamoto, W., Ohsumi, Y. and Nishimura, M. (2013).
Highly oxidized peroxisomes are selectively degraded via autophagy in Arabidopsis.
The Plant Cell, Vol. 25: 4967-4983. y
PubMedzNikon A1 ack

(27) Takeda, N., Tsuzuki, S., Suzaki, T., Parniske, M. and Kawaguchi, M.(2013).
CERBERUS and NSP1 of Lotus japonicus are common symbiosis genes that modulate arbuscular mycorrhiza development.
Plant Cell Physiol. 54(10):1711-1723. y
PubMedzNikon A1 ack

(26) Okuyama, T., Isoe, Y., Hoki, M., Suehiro, Y., Yamagishi, G., Naruse, K., Kinoshita, M., Kamei, Y., Shimizu, A., Kubo, T. and Takeuchi, H. (2013).
Controlled Cre/loxP site-specific recombination in the developing brain in medaka fish,
Oryzias latipes.
8, e66597.
yPubMedzIR-LEGO s12-104t

(25) Murata, T., Sano, T., Sasabe, M., Nonaka, S., Higashiyama, T., Hasezawa, S., Machida, Y. and Hasebe, M. (2013).
Mechanism of microtubule array expansion in the cytokinetic phragmoplast.
Nature Communications 4,1967.  
yJournal sitezNikon-A1  ack press release (NIBB)

(24) Sato-Numata, K., Numata, T., Okada, T. and Okada, Y. (2013).
Acid-sensitive outwardly rectifying (ASOR) anion channels in human epithelial cells are highly sensitive to temperature and independent of CIC-3.
Pflugers Arch.-Eur. J. Physiol.

(23) Suzaki, T., Ito, M. and Kawaguchi, M. (2013).
Induction of localized auxin response during spontaneous nodule development in Lotus japonicus.
Plant Signal & Behav.
yPubMedzNikon-A1 ack

(22) Takahara, M., Magori, S., Soyano, T., Okamoto, S., Yoshida, C., Yano, K., Sato, S., Tabata, S., Yamaguchi, K., Shigenobu, S., Takeda, N., Suzaki, T. and Kawaguchi, M. (2013).
Too much love, a novel Kelch repeat-containing F-box protein, functions in the long-distance regulation of the legume-Rhizobium symbiosis.
Plant Cell Physiol. 54, 4, 433-447.
yPubMedzZeiss LSM5DUO, ack

(21) Yamagata, Y., Kaneko, K., Kase, D., Ishihara, H., Nairn, A.C., Obata, K. and Imoto, K. (2013).
Regulation of ERK1/2 mitogen-activated protein kinase by NMDA-receptor-induced seizure activity in cortical slices.
Brain Res. 24, 1507, 1-10.
yPubMedz Olympus-FV1000

(20) Kimura, E., Deguchi, T., Kamei, Y., Shoji, W., Yuba, S. and Hitomi, J. (2013).
Application of infrared laser to the zebrafish vascular system: gene induction, tracing, and ablation of single endothelal cells.
Arterioscler. Thromb. Vasc. Biol. (Epub)
yPubMedzIR-LEGO, Zeiss LSM5DUO, ack s11-336tpress release (ŠâŽèˆã‘å)(NIBB)

(19) Hira, R., Ohkubo, F., Tanaka, Y. R.,  Masamizu, Y., Augustine, J. G., Kasai, H. and Matsuzaki, M. (2013).
In vivo optogenetic tracing of functional corticocortical connections between motor forelimb areas.
Front Neural Circuits. 7, 55,1-10. 
yPubMedzZeiss LSM5DUO, ack

(18) Shimada, A., Kawanishi, T., Kaneko, T., Yoshihara, H., Yano, T., Inohaya, K., Kinoshita, M., Kamei, Y., Tamura, K. and Takeda, H. (2013).
Trunk exoskeleton in teleosts is mesodermal in origin.
Nature Communications 4, 1639.
yJournal sitezIR-LEGO, ack s10-361, 11-339t press release (“Œ‘嗝j(NIBB)

(17) Kobayashi, K., Kamei, Y., Kinoshita, M., Czerny, T. and Tanaka, M.(2013).
A heat-inducible CRE/LOXP gene induction system in medaka.
Genesis 51, 59-67.
yPubMedzIR-LEGO, ack

(16) Moritoh, S., Komatsu, Y., Yamamori, T. and Koizumi, A. (2013).
Diversity of retinal ganglion cells identified by transient GFP transfection in organotypic tissue culture of adult marmoset monkey retina.
PLoS ONE. 8, e54667.
yPubMedzNikon-A1, IMARIS ack

(15) Suzaki,T., Kim,C. S., Takeda, N., Szczyglowski, K. and Kawaguchi, M. (2013).
TRICOT encodes an AMP1-related carboxypeptidase that regulates root nodule development and shoot apical meristem maintenance in Lotus japonicus.
Development 140, 353-361.
yPubMedzNikon-A1 ack@press release(NIBB)

(14) Aoyama, T., Hiwatashi, Y., Shigyo, M., Kofuji, R., Kubo, M., Ito, M. and Hasebe, M. (2012).
AP2-type transcription factors determine stem cell identity in the moss Physcomitrella patens.

Development 139, 3120-3129 yPubMedzNikon-A1

(13) Suzaki, T., Yano, K., Ito, M., Umehara, Y., Suganuma, N. and Kawaguchi, M. (2012). 
Positive and negative regulation of cortical cell division during root nodule development in Lotus japonicus is accompanied by auxin response.
Development 139,21,3997-4006.
yPubMedzNikon-A1 ack press release(NIBB)

(12) Watakabe, A., Kato, S., Kobayashi, K., Takaji, M., Nakagami, Y., Sadakane, O., Ohtsuka, M., Hioki, H., Kaneko, T., Okuno, H., Kawashima, T., Bito, H., Kitamura, Y. and Yamamori, T. (2012).
Visualization of cortical projection neurons with retrograde TET-off lentiviral vector.
PLoS ONE. 7, e46157.
yPubMedzNikon-A1  ack

(11) Satoh, C., Kimura, Y. and Higashijima, S.(2012).
Generation of
multiple classes of V0 neurons in zebrafish spinal cord: Progenitor heterogeneity and temporal control of neuronal diversity.@
J. Neurosci. 32,1771–1783. yPubMedzNikon-A1

(10) Moritoh, S., Eun, C-H., Ono, A., Asao, H., Okano, Y., Yamaguchi, K., Shimatani, Z., Koizumi, A. and Terada, R. (2012).
Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation.
Plant J. 71,85-98.
yPubMedzNikon-A1  ack

(9) Takeda, N., Maekawa, T. and Hayashi, M. (2012).
Nuclear-localized and deregulated calcium- and calmodulin-dependent protein kinase activates rhizobial and mycorrhizal responses in Lotus japonicus.
Plant Cell 24, 810-822.

(8) Watanabe, T., Tanabe, H. and Horiuchi, T. (2011).
Gene amplification system based on double rolling-circle replication as a model for oncogene-type amplification.
Nucleic Acids Res. 39, 16, e106.

(7) Hamasaka, G., Muto, T. and Uozumi, Y. (2011).  
A novel amphiphilic pincer palladium complex: Design, preparation and self-assembling behavior.
Dalton Trans. 40, 8859–8868.

(6) Inada, H., Watanabe, M., Uchida, T., Ishibashi, H., Wake, H., Nemoto, T., Yanagawa, Y.,  Fukuda, A. and Nabekura, J. (2011).
GABA regulates the multidirectional tangential migration of GABAergic interneurons in living neonatal mice.
6, e277048.
@yPubMedzLeica-TCS SP2@ack

(5) Moritoh, S., Sato, K., Okada, Y. and Koizumi, A. (2011).
Endogenous arginine vasopressin–positive retinal cells in arginine vasopressin– EGFP transgenic rats identified by immunohistochemistry and reverse transcriptase–polymerase chain reaction.
Mol.Vis. 17, 3254-3261.

(4) Okubo, T., Kawamura, A., Takahashi, J., Yagi, H., Morishima, M., Matsuoka, R. and Takada, S. (2011).
Ripply3, a Tbx1 repressor, is required for development of the pharyngeal apparatus and its derivatives in mice.
Development 138, 339-348.

(3) Hamasaka, G., Muto, T. and Uozumi, Y. (2011).
Molecular-architecture-based administration of catalysis in water: Self-assembly of an amphiphilic palladium pincer complex.
Angew. Chem. 50, 4876-4878.

(2) Takahashi, J., Ohbayashi, A., Oginuma, M., Saito, D., Mochizuki, A., Saga, Y. and Takada, S. (2010).
Analysis of Ripply1/2-deficient mouse embryos reveals a mechanism underlying the rostro-caudal patterning within a somite.
Dev Biol. 342, 134-145.

(1) Nakamura, S., Kobayashi, K., Nishimura, T., Higashijima, S. and Tanaka, M. (2010).
Identification of germline stem cells in the ovary of the teleost medaka.
Science 328, 1561-1563.
@yPubMedzOlympus-FV1000@press release(NIBB)


(2) Miyakawa, H., Iguchi, T. and Miura, T. (2014).
Developmental process of defensive morph in Daphnia Pulex.
Daphnia: Biology and Mathematics Perspectives Nikon A1 ack

(1) Ishihara, H. (2012) 
Analysis of morphological characteristics of rat spinal cord neurons involved in pain transmission using the Venus rat.
Seibutsugaku and Seirigaku Gijutsu Kenkyukai hokoku. 82-85. (in Japanese)  Olympus-FV1000 @ack