library | Host strain | vector backbone | 5' primer | 3' primer | cap signature seq (end of non-template) | seq after polyA | |||
pph | cap-trapper | bluescript with a loxP site(excise | M13-21 or T7 | reverse or T3 | acagcgatgactcgagaaccg | ctctccaggg ttggatccgg ccataagggc ctgatccttc | |||
pphb | cap-trapper | bluescript with a loxP site(excise | M13-21 or T7 | reverse or T3 | acagcgatgactcgagaaccg | ctctccaggg ttggatccgg ccataagggc ctgatccttc | |||
pphn | cap-trapper | bluescript with a loxP site(excise | M13-21 or T7 | reverse or T3 | acagcgatgactcgagaaccg | ctctccaggg ttggatccgg ccataagggc ctgatccttc | |||
pphf | v-capping | DH12S | pGCAPzf3 | M13-21 or T7 | reverse | gggcgaattggcggccaaatcggccgaatt | ggccataagggccagcttgagtattctatagtg | ||
ppsp | oligo-capping | DH5alpha | pME18S-FL3 (AB009864) | SP5 | SP3M | cgagcactgt tggcctactg g | ggccacatgt gctcgagctg caggtcgcgg ccgctagact agtctagaga |
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ppls | oligo-capping | pME18S-FL3 (AB009864) | SP5 | SP3M | cgagcactgt tggcctactg g | ggccacatgt gctcgagctg caggtcgcgg ccgctagact agtctagaga | |||
ppaa | oligo-capping | pME18S-FL3 (AB009864) | SP5 | SP3M | cgagcactgt tggcctactg g | ggccacatgt gctcgagctg caggtcgcgg ccgctagact agtctagaga | |||
ppgs | oligo-capping | pME18S-FL3 (AB009864) | SP5 | SP3M | cgagcactgt tggcctactg g | ggccacatgt gctcgagctg caggtcgcgg ccgctagact agtctagaga | |||
primer | |||||||||
M13-21 | tgtaaaacgacggccagt | ||||||||
Reverse | agcggataacaatttcacacagg | ||||||||
SP5 | cttctgctctaaaagctgcg | ||||||||
SP3M | tgtgggaggttttttctcta | ||||||||
T3 | aattaaccctcactaaaggg | ||||||||
T7 | taatacgactcactataggg | /(alternative) gtaatacgactcactatagggcga |