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National Institutes of Natural Sciences

National Institute for Basic Biology

International Cooperation

Princeton University - Symposium

The 1st NIBB - Princeton Symposium "Proteomics, Metabolomics, and Beyond"

Organizers James Broach (Princeton Univ.), Joshua Rabinowitz (Princeton Univ.), Shosei Yoshida (NIBB), Shuji Shigenobu (NIBB), Satoru Kobayashi (NIBB)
Venue Okazaki
Date Nov. 1 - 2, 2011
Link Symposium website (http://www.nibb.ac.jp/nibb_princeton1/)
Poster

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The 1st NIBB-Princeton Symposium, “Proteomics, Metabolomics, and Beyond” was held on November 1st and 2nd, 2011 at the Okazaki Conference Center. This was the inaugural symposium of the academic exchange program between the National Institutes of Natural Sciences and Princeton University, which aims to increase scientific interaction between these institutions, with NIBB and Princeton’s of Department of Molecular Biology playing central roles. This symposium was originally scheduled for July 2011, but was forced to be postponed due to the hardships following the earthquake in March. This symposium gathered researchers performing unique biological investigations taking advantages of “-omics” approaches such as proteomics and metabolomics. Cutting edge research such as the interplay between extracellular nutrient and intracellular metabolism in yeast, the structural basis of metabolic enzyme localization and origin of the cytoskeleton in bacteria, comprehensive analyses of spatial distribution of lipid and protein molecules (i.e., imaging mass-spectrometry), identification of plant hormones with unique protein modifications, and real-time imaging of ATP in living cells, have made us realize that biology is changing dramatically at this very moment. NIBB’s ongoing research was also introduced by sort talks and poster presentations, which stimulated intensive discussions. The participants came to an understanding of each other’s ideas and interests, which we hope will ignite future communications and scientific interactions. After the symposium, participants from Princeton University and invitees from outside NIBB deepened their communications by touring around the labs and core facilities of NIBB On behalf of the organizers, we thank all the participants, the staff of the Office of International Cooperation, and the organizers’ lab members, who have worked hard to conduct this symposium successfully.
- Shosei Yoshida, Satoru Kobayashi, and Shuji Shigenobu

 

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Program
November 1st, Tuesday
09:15 - 09:50 Registration
09:40 - Poster Display
09:50 - 10:00 Opening Remarks
        Kiyotaka Okada (NIBB, Japan)
Session I  
Chair: Shosei Yoshida (NIBB, Japan)
10:00 - 10:50 “Regulation of Metabolic Flux in Yeast”
      James Broach (Princeton Univ.)
10:50 - 11:40 “Discovery of Antiviral Roles of Mammalian Sirtuins: A Systems Biology View”
      Ileana Cristea (Princeton Univ.)
11:40 - 12:00 “Proteins Identified as Novel Peroxisomal Biogenesis Factors by Proteomic Analysis”
      Songkui Cui (NIBB)
12:00 - 13:20 Lunch
Session II  
Chair: James Broach (Princeton Univ., USA)
13:20 - 14:10 in situ Proteomics with Imaging Mass Spectrometry in the Scrapper-knockout Mouse Brain”
      Ikuko Yao (Kansai Medical Univ.)
14:10 - 14:30 “Characterization of Mouse Male Germline Stem Cell Niche by Gene Expression Profiling Using Laser Capture Microdissection”
      Yu Kitadate (NIBB)
14:30 - 15:50 Poster Viewing with Coffee Break
    
Session III  
Chair: Shuji Shigenobu (NIBB, Japan)
15:50 - 16:40 “Analyses of Lipid Localization and Molecular Species in Mammalian Tissues by Liquid Extraction Surface Analysis”
      Ryo Taguchi (Chubu Univ.)
16:40 - 17:00 “RepEdLEGG: A Nonlinear Dimensionality Reduction and Feature Detection Algorithm to Translate -omics Data to a Network Model”
      Masanao Sato (NIBB)
17:00 - 17:15 Coffee Break
17:15 - 18:05 “Distribution and Dynamics of ATP Level Inside Living Cells”
      Hiromi Imamura (Kyoto Univ.)
18:05 - 18:25 “In Search for the Factors Involved in Balancing of Sex”
      Minoru Tanaka (NIBB)
18:30 - Mixer
   
November 2nd, Wednesday
Session IV  
Chair: Satoru Kobayashi (NIBB, Japan)
09:20 - 10:10 “Genomic and Transcriptomic Revelations of a Mutualism: The Pea Aphid and Its Obligate Bacterial Symbiont”
      Shuji Shigenobu (NIBB)
10:10 - 11:00 “The Bacterial Cytoskeleton and Metabolism”
      Zemer Gitai (Princeton Univ.)
11:00 - 11:20 Coffee Break
11:20 - 12:10 “Secreted Peptide Signals Required for Maintenance of Root Stem Cell Niche in Arabidopsis
      Yoshikatsu Matsubayashi (NIBB)
12:10 - 12:20 Closing Remarks
        Shosei Yoshida (NIBB, Japan)